DRSC/TRiP Functional Genomics Resources

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Protein Alignment FGFR3 and Fgfr3

DIOPT Version :9

Sequence 1:XP_006713931.1 Gene:FGFR3 / 2261 HGNCID:3690 Length:811 Species:Homo sapiens
Sequence 2:XP_006251452.1 Gene:Fgfr3 / 84489 RGDID:620714 Length:804 Species:Rattus norvegicus


Alignment Length:811 Identity:747/811 - (92%)
Similarity:767/811 - (94%) Gaps:7/811 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGAPACALALCVAVAIVAGASSESLGTEQRVVGRAAEVPGPEPGQQEQLVFGSGDAVELSCPPPG 65
            |..|||.|..||||  |||.:||..|.||||..||||||||||.||||:.|||||.|||||.|||
  Rat     1 MVVPACVLVFCVAV--VAGVTSEPPGPEQRVGRRAAEVPGPEPSQQEQVAFGSGDTVELSCHPPG 63

Human    66 GGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPS 130
            |.|.|||:|.|||.|||.|.|:||||||||||||:|||:|.|||:||||:|||||||||||||||
  Rat    64 GAPTGPTLWAKDGVGLVASHRILVGPQRLQVLNATHEDAGVYSCQQRLTRRVLCHFSVRVTDAPS 128

Human   131 SGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREF 195
            |||||||||.||    ||||||||||||||||||||||||||||||||||||||||||||||:||
  Rat   129 SGDDEDGEDVAE----DTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGKEF 189

Human   196 RGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLP 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   190 RGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLP 254

Human   261 ANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRL 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||.||||
  Rat   255 ANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISENVEADARLRL 319

Human   326 ANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELVEADEAGSVYAGILSYGVGFFLFIL 390
            ||||||||||||||||||||||||||||.||||:||||||:|.|||||||||:||||||||||||
  Rat   320 ANVSERDGGEYLCRATNFIGVAEKAFWLRVHGPQAAEEELMEVDEAGSVYAGVLSYGVGFFLFIL 384

Human   391 VVAAVTLCRLRSPPKKGLGSPTVHKISRFPLKRQVTVSLESNASMSSNTPLVRIARLSSGEGPTL 455
            |||||||||||||||||||||||||:||||||||||||||||:||:|||||||||||||||||.|
  Rat   385 VVAAVTLCRLRSPPKKGLGSPTVHKVSRFPLKRQVTVSLESNSSMNSNTPLVRIARLSSGEGPVL 449

Human   456 ANVSELELPADPKWELSRARLTLGKPLGEGCFGQVVMAEAIGIDKDRAAKPVTVAVKMLKDDATD 520
            ||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||||||||||
  Rat   450 ANVSELELPADPKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDRTAKPVTVAVKMLKDDATD 514

Human   521 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQGGPLYVLVEYAAKGNLREFLRARRPPGLDYSFDT 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||.
  Rat   515 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQGGPLYVLVEYAAKGNLREFLRARRPPGMDYSFDA 579

Human   586 CKPPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNLD 650
            |:.||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   580 CRLPEEQLTCKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNLD 644

Human   651 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH 715
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   645 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH 709

Human   716 RMDKPANCTHDLYMIMRECWHAAPSQRPTFKQLVEDLDRVLTVTSTDQEYLDLSAPFEQYSPGGQ 780
            ||||||||||||||||||||||.||||||||||||||||:||||||| ||||||.||||||||||
  Rat   710 RMDKPANCTHDLYMIMRECWHAVPSQRPTFKQLVEDLDRILTVTSTD-EYLDLSVPFEQYSPGGQ 773

Human   781 DTPSSSSSGDDSVFAHDLLPPAPPSSGGSRT 811
            ||||||||||||||.||||||.|||:||.||
  Rat   774 DTPSSSSSGDDSVFTHDLLPPGPPSNGGPRT 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FGFR3XP_006713931.1 IGc2 53..110 CDD:197706 43/56 (77%)
IG 54..125 CDD:214652 55/70 (79%)
Ig2_FGFR 161..245 CDD:143265 82/83 (99%)
IG_like 171..245 CDD:214653 72/73 (99%)
IG_like 260..355 CDD:214653 92/94 (98%)
Ig3_FGFR 268..356 CDD:143175 84/87 (97%)
PKc_like 463..797 CDD:304357 321/333 (96%)
Pkinase_Tyr 476..752 CDD:285015 268/275 (97%)
Fgfr3XP_006251452.1 IGc2 51..108 CDD:197706 43/56 (77%)
IG 52..123 CDD:214652 55/70 (79%)
Ig2_FGFR 155..239 CDD:143265 82/83 (99%)
IG_like 254..349 CDD:214653 92/94 (98%)
Ig3_FGFR 262..350 CDD:143175 84/87 (97%)
PTKc_FGFR3 457..790 CDD:173652 321/333 (96%)
Pkinase_Tyr 470..746 CDD:285015 268/275 (97%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83695215
Domainoid 1 1.000 558 1.000 Domainoid score I5641
eggNOG 1 0.900 - - E1_KOG0200
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55437
Inparanoid 1 1.050 1442 1.000 Inparanoid score I2969
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG50158
OrthoDB 1 1.010 - - D119660at33208
OrthoFinder 1 1.000 - - FOG0000923
OrthoInspector 1 1.000 - - oto143239
orthoMCL 1 0.900 - - OOG6_100013
Panther 1 1.100 - - LDO PTHR24416
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X537
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1717.310

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