DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FGFR1 and Cad96Ca

DIOPT Version :9

Sequence 1:XP_011542745.1 Gene:FGFR1 / 2260 HGNCID:3688 Length:865 Species:Homo sapiens
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:886 Identity:244/886 - (27%)
Similarity:377/886 - (42%) Gaps:261/886 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    29 NCRTGMWSW--KCLLFWAVLVTATLCTARPSPTLPEQAQPWGAPVEVESFLVHPGDLLQLRCRLR 91
            :||..:.||  :.||...::||||:.      :|..|        |.|:...:...:|.:|.|  
  Fly    14 HCRKQLTSWRRRSLLLTIIVVTATVV------SLISQ--------EAEAHNQNAPPILYVRER-- 62

Human    92 DDVQSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALP 156
                  ||     :::|:.:.....:.|..:|               |.|.| ..|.:....:||
  Fly    63 ------NW-----RISETEKVGQIIDRVRAED---------------PDGDD-LIFGIEPRFSLP 100

Human   157 SSEDDDDDDDSSSEEKETDNTKPNRMPVAPYWTSPEKMEKKLHAVPAAKTVKFKCPSSGTPNPTL 221
            ..|     :|:|..||                 .|.:::::...|              |.|.:|
  Fly   101 GGE-----NDASPPEK-----------------IPFQIDRETGVV--------------TLNESL 129

Human   222 RWLKNGKEFKPDHRIGGYKVRYATWSIIMDSVVPSDKGNYTC-------IV---ENEYGSINHTY 276
            .. :.|:.|          :.|.|   :.|       |:||.       |:   ||..|....|.
  Fly   130 AG-RAGQNF----------LIYIT---VTD-------GSYTAKNEVFINILGERENSSGYRPQTS 173

Human   277 QLDVV----------ERSPHRPILQAGLPANK---------------TVALGSNVEFMCKVYSDP 316
            ..:||          ::.|....::.|||.::               ....|:|       |..|
  Fly   174 ISNVVHNISQFLPRFDQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFGPPPFGNN-------YPPP 231

Human   317 QPHIQWLKHIEVNGSKIGPDNLPYVQILKTAGV---NTTDKEMEVL------HLRNVSFEDAGEY 372
            .|:|.     .|.|.:.|.:..|..::..|..|   :||.|....|      :...|......|.
  Fly   232 PPNIP-----GVRGEQSGEEEQPDEEVTPTTPVRISSTTPKSRTKLTPITANNSTRVESAIPAET 291

Human   373 TCLAGNSIGLSHH---SAWLTVLEALEERPAVMTSPLYLEIIIYCTGAFLISCMVGSVIVY---- 430
            |..:|     .||   |:.:|:......     |.|     |:...|.|.::..|  ::.|    
  Fly   292 TTPSG-----GHHNNSSSPITIFSLKSG-----TIP-----IVVTVGGFFVAIAV--LLAYLCRR 339

Human   431 ----------KMK--------------SGTKKSDFHSQMAVHK-------LAKSIPLRRQ----V 460
                      |.|              |.|...|..:.|.:.:       ..:.:|..|.    :
  Fly   340 RLCAISRTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGI 404

Human   461 TVSADSSASMNSGVLLVRPSRLSSSGTP---------------MLAGVSEYELPED--------P 502
            ..|..|:...|.||        ||.|.|               :..|......||:        .
  Fly   405 ATSQLSTGVTNGGV--------SSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCD 461

Human   503 RWELPRDRLVLGKPLGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 567
            |||.||.||.....||||.||||...||..::.::  .:|.||||.||..|||.|..||:||:|:
  Fly   462 RWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNE--GITTVAVKTLKESATEVDRKDLLSELEV 524

Human   568 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 632
            ||.:..|.|:::|||.||...|.:||:||.::|.|:.||::.|   .|..|..:|.....|:|.|
  Fly   525 MKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSR---AERHYGNTHGKSNVLTSCD 586

Human   633 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 697
            |.|..||||:||:||.|:..|||||||||:|:|:|:..|:||||.|||:.....|::.:.|:||:
  Fly   587 LTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPI 651

Human   698 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL 762
            :|||.|:|:|.|::.:||:||||:|:|||.|||.:||||:...::.:.:::|:|::||.:|..||
  Fly   652 RWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRREL 716

Human   763 YMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQVLHPDL 803
            |.:|..||...|.:||.|.::::.||::        ||.::
  Fly   717 YNIMYYCWSHDPQERPLFAEIIQMLDKL--------LHTEM 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FGFR1XP_011542745.1 Ig1_FGFR 73..151 CDD:143174 13/77 (17%)
IG_like 77..151 CDD:214653 12/73 (16%)
I-set 193..280 CDD:254352 17/96 (18%)
Ig2_FGFR 196..280 CDD:143265 17/93 (18%)
IG_like 295..391 CDD:214653 24/122 (20%)
Ig3_FGFR 303..392 CDD:143175 24/100 (24%)
PTKc_FGFR1 497..797 CDD:270678 136/307 (44%)
Pkinase_Tyr 511..787 CDD:285015 126/275 (46%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 28/171 (16%)
STYKc 470..741 CDD:214568 126/275 (46%)
PTKc 474..742 CDD:270623 125/272 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
32.770

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