DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc6a20b and CG15279

DIOPT Version :9

Sequence 1:NP_035861.2 Gene:Slc6a20b / 22599 MGIID:1336891 Length:635 Species:Mus musculus
Sequence 2:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster


Alignment Length:628 Identity:170/628 - (27%)
Similarity:299/628 - (47%) Gaps:114/628 - (18%)


- Green bases have known domain annotations that are detailed below.


Mouse    44 VEKVRPKWDNPLQFLLVCISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAV 108
            |.:.|..|...::||:.||:.:||||||||||:.....|||:||:||:|:|.:.|.|:.|||:.:
  Fly    46 VPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVI 110

Mouse   109 GQRMRQGSIGAWRTISPYLSGVGIASLVVSFLASVYFNVINTWALWYLFHSFQDPLPWSVCP--- 170
            ||...:||:..: .:.|.:.|||.......|:.|.|:..:......|...||::|||||.|.   
  Fly   111 GQFSSRGSVKVF-DLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPLPWSTCRAEW 174

Mouse   171 ----LNS------------------NHTGYDEECEKASSTQYFWYRKTLNISPSIQENGGV-QWE 212
                :||                  |:|...:.....:|:::::.::.|:..|:|:|..|: .||
  Fly   175 GIHCINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEVLHEKPNIEEGIGLPNWE 239

Mouse   213 PALCLTLAWLMVYLCILRGTESTGKVVYFTTSLPYFVLIIYLVRGLTLHGATNGLAYMFTPKIEQ 277
            ..:.|.:||..|:..|.||.:|:||..||....||.::.:.|||.:||.|:.:|:.|...|:..:
  Fly   240 LVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWGK 304

Mouse   278 LANPKAWINAATQIFFSLGLGCGGLIAFASYNEPSNDCQKHALIVSVINSTTAIFSSIVTFSIYG 342
            :.:||.|..|.||.|:||.:..|.:|.::|:|:..::..:.|.||:.:::.|::.:....|.|.|
  Fly   305 ILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGILG 369

Mouse   343 FKATFNYENCLNKVILLLTNSFDLEDGFLTVSNLEEVKNYLASTYPNKYSEVFPHIRNCSLESEL 407
                                                                  |:.:.....::
  Fly   370 ------------------------------------------------------HLAHEIGTDDI 380

Mouse   408 DTAVQ-GTGLAFIVYTEAI-KNMEVSQLWSVLYFFMLLTLGMGSMVGTGTAILTPLTDSKIISSY 470
            .:.|: |.|||||.|.:|| |...:.|::|||:|.||..||:||.:...:..:|.:.|.      
  Fly   381 GSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDR------ 439

Mouse   471 LP---KEAISGLVCLLNCAIGMVFTMEAGNYWFDLFNDYTATLSLLLIVLVETIAVCYVYGLKRF 532
            .|   :...|.|:.:::..||:::....|.|...|.:.:.|::..|::.:.|...:.::||..|.
  Fly   440 FPNFGQWQCSLLIAVVSFFIGLMYITPGGQYMLTLVDFFGASMIALVLGIAELYTIGWIYGTDRL 504

Mouse   533 ESDLRAMTGRTLSWYWKVMWAFVSPLLIVGLFIFYLSDY--ILTGTLQYQAWDATQGHVVTKDYP 595
            ..|:..|.||.:..||::.|:.::||::..:.|::.:.|  :....:.|..|..:.|.::|    
  Fly   505 CKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATYQPLTYNNIVYPNWSYSIGWLIT---- 565

Mouse   596 TYALAVIGLLVASSTMCIPLV-----ALGTFVTRHFKIREQFS 633
                 ..|:|.....|.:.:|     .||.      |||..|:
  Fly   566 -----AFGILQLPIWMIVAIVRDPGQTLGA------KIRGAFT 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a20bNP_035861.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38
SLC5-6-like_sbd 45..620 CDD:294310 164/612 (27%)
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 169/624 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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