DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc6a18 and CG8850

DIOPT Version :9

Sequence 1:NP_001035782.1 Gene:Slc6a18 / 22598 MGIID:1336892 Length:615 Species:Mus musculus
Sequence 2:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster


Alignment Length:645 Identity:192/645 - (29%)
Similarity:307/645 - (47%) Gaps:131/645 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 ASGMDPLVDIEDE------RPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIA 62
            |.|.:..::.|.|      |.:|...:::|.|||..:|||||:||||::...:|||||||||.|.
  Fly    38 AEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIV 102

Mouse    63 LVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLN 127
            |:..|.|::|:|:.|||...||.|..: .::|.:.|:..|....:.|.:.||..::...:.:.:.
  Fly   103 LLLIGRPVYYLEVIIGQFSSRGCIRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVA 166

Mouse   128 SFQHPLPWSTCPLDLNRTGFVQECQSSGTV-------------SYFWYRQTL---NITSDISNTG 176
            ||...|||:.|.::..::     |.::|..             :..::.||:   ..:.|.:..|
  Fly   167 SFSEVLPWTYCLVEWGKS-----CVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLG 226

Mouse   177 TIQWKLFLCLVACWSTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLIYLFT 241
            |..|.|.|||:|.|..:...:.:||.|:||..||.|||||:::.:.|||.:|||||.:|::|...
  Fly   227 TPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLK 291

Mouse   242 PNMKTLQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASIAI 306
            |....|.||.||..|.||:||||::.||..:.:||:|....|..||.:||..::|:||:.|...|
  Fly   292 PQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCII 356

Mouse   307 FSVMGFKASNDYGRCLDRNILSLINEFDLPELSISRDEYPSVLMYLNATQTARVAQLPLKTCHLE 371
            |.::|..|                  |:                    |.|..::|:        
  Fly   357 FGILGNLA------------------FE--------------------TNTKDISQV-------- 375

Mouse   372 DFLDKSASGPGLAFIVFTEAVL---HMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLLD-MG 432
                 ...|.|||||.:.||:.   ::|  .:::||||.||..||:.|..|....|:..:.| ..
  Fly   376 -----VKGGAGLAFISYPEAIAKFKYLP--QLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFT 433

Mouse   433 ILPKGIPKEVMTGVICFACFLSAICFTLQSGGYWLEIFDSFAASLNLIIFAFMEVVGVIHIYGMK 497
            .||..: ..|...:|.|.|   .:.:....|.:.|.:.|.:..:...::.|..|::.|..|||:|
  Fly   434 HLPHWL-LAVSASIIGFLC---GLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVK 494

Mouse   498 RFCDDIEWMTGRRPGLYWQVTWRVVSPMLLFGIFL----SYIVLL---IQTPPSYKAWNPQYEHF 555
            |.|.|||:|...:...||::.|.:|:|.|:|.:.:    ||..|.   :|.||.|          
  Fly   495 RICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVY---------- 549

Mouse   556 PSREEKFYPGWVQVTCVLLSFLPSLWVPGVALAQ-----LLSQYKQRWKATHLESGLKLQ 610
                  :..||:            :|  |:.:.|     |::.|:|..|....:.||.:|
  Fly   550 ------YMAGWI------------IW--GLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQ 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a18NP_001035782.1 SLC6sbd_B0AT3 16..591 CDD:212086 182/612 (30%)
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 168/536 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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