DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc6a18 and CG15279

DIOPT Version :9

Sequence 1:NP_001035782.1 Gene:Slc6a18 / 22598 MGIID:1336892 Length:615 Species:Mus musculus
Sequence 2:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster


Alignment Length:657 Identity:198/657 - (30%)
Similarity:314/657 - (47%) Gaps:131/657 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 IEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVFEGIPLFYIELAI 77
            :.:||..|...:::|:|||..:|||||:||||:....:|||||||||.|.|...|.|::|:|:.|
  Fly    46 VPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVI 110

Mouse    78 GQRLRRGSIGVWKTISPYLGGVGLG-CFSVSFLVSLYYNTVLLWVLWFFLNSFQHPLPWSTCPL- 140
            ||...|||:.|: .:.|.:.|||.| .|.| |::|.||..::..:..:|:.||::|||||||.. 
  Fly   111 GQFSSRGSVKVF-DLCPAMKGVGAGQAFQV-FMLSTYYAALVAIIGRYFIESFRNPLPWSTCRAE 173

Mouse   141 ---------------------DLNRTGFVQECQSSGTV-SYFWY--RQTLNITSDI-SNTGTIQW 180
                                 |.....:..:.|:...: |..||  ::.|:...:| ...|...|
  Fly   174 WGIHCINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEVLHEKPNIEEGIGLPNW 238

Mouse   181 KLFLCLVACWSTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLIYLFTPNMK 245
            :|.:.|...||.|:..:.||::|:||..||.|||||:::.:.|:|.:||||:.:|:.|...|...
  Fly   239 ELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWG 303

Mouse   246 TLQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASIAIFSVM 310
            .:.:|:||..|.||.|:|||:.||..|.::|:|...:|..:||.|:..:::||||.|...||.::
  Fly   304 KILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGIL 368

Mouse   311 GFKASNDYGRCLDRNILSLINEFDLPELSISRDEYPSVLMYLNATQTARVAQLPLKTCHLEDFLD 375
            |..|.                       .|..|:..||:                          
  Fly   369 GHLAH-----------------------EIGTDDIGSVV-------------------------- 384

Mouse   376 KSASGPGLAFIVFTEAVL---HMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLLDMGILPKG 437
              ..|.|||||.:.:|:.   ::|  .::|||||.|||.||:.|........:|.:.|.      
  Fly   385 --KGGAGLAFISYPDAIAKFKNLP--QIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDR------ 439

Mouse   438 IPK------EVMTGVICFACFLSAICFTLQSGGYWLEIFDSFAASLNLIIFAFMEVVGVIHIYGM 496
            .|.      .::..|:.|  |:..:..| ..|.|.|.:.|.|.||:..::....|:..:..|||.
  Fly   440 FPNFGQWQCSLLIAVVSF--FIGLMYIT-PGGQYMLTLVDFFGASMIALVLGIAELYTIGWIYGT 501

Mouse   497 KRFCDDIEWMTGRRPGLYWQVTWRVVSPMLLFGIFLSYIVLLIQTPPSYKAWNP-QYEHFPSREE 560
            .|.|.|||:|.||:.||||::.|.:::|:::..|.:.:          |..:.| .|.:......
  Fly   502 DRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYF----------YATYQPLTYNNIVYPNW 556

Mouse   561 KFYPGWVQVTCVLLSFLPSLWV-------PGVAL-AQLLSQY--KQRW--------KATHLESGL 607
            .:..||: :|...:..|| :|:       ||..| |::...:  |:.|        :..|.|...
  Fly   557 SYSIGWL-ITAFGILQLP-IWMIVAIVRDPGQTLGAKIRGAFTPKKNWGPSDPLLREQYHKEIEN 619

Mouse   608 KLQESRG 614
            :|...||
  Fly   620 ELTPKRG 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a18NP_001035782.1 SLC6sbd_B0AT3 16..591 CDD:212086 191/619 (31%)
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 190/623 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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