DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc6a18 and ine

DIOPT Version :10

Sequence 1:NP_001035782.1 Gene:Slc6a18 / 22598 MGIID:1336892 Length:615 Species:Mus musculus
Sequence 2:NP_477012.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster


Alignment Length:615 Identity:201/615 - (32%)
Similarity:311/615 - (50%) Gaps:107/615 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse     8 DPLVDIEDE----RPK---WDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVF 65
            |..:|:.||    :|:   |.||:|::|:|||::|||||:|||||:|...|||.||:||.|.|..
  Fly   321 DSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFI 385

Mouse    66 EGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQ 130
            ..|||.::||::||...||.||....:.|...|.||....||||:|.||:.::.:.:::|..||:
  Fly   386 CSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFK 450

Mouse   131 HPLPWSTCPLDLNRTGFVQEC-------------QSSGTVS-YFWYRQTLNITSDISNTGTIQWK 181
            ..:||    :|.|......:|             .:|.|.| .|:..:.|.|:..:...|.::|:
  Fly   451 TEMPW----IDCNNRWNTPDCWVPQRKGINASAPDTSRTPSEEFFENKVLQISGGLEYPGMMRWE 511

Mouse   182 LFLCLVACWSTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLIYLFTPNMKT 246
            ||.||:..|..||....:.|:|:.||.||||.||::::.|.::|.:||.||.|||.:.|.|....
  Fly   512 LFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSE 576

Mouse   247 LQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASIAIFSVMG 311
            |:|..||::||:|.|.||.:.||..|:|||||...||..:|.|.::.||.:|||...|..||.:|
  Fly   577 LKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLG 641

Mouse   312 FKASNDYGRCLDRNILSLINEFDLPELSISRDEYPSVLMYLNATQTARVAQLPLKTCHLEDFLDK 376
            ..|       |::|                                             .:..|.
  Fly   642 NLA-------LEQN---------------------------------------------TNVRDV 654

Mouse   377 SASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLLDMGILPKGIPKE 441
            ...|||:.|:|:.:|:..||.|.:|:|:||.||..|||:|.|..:|.|:|.:.|      |.|:.
  Fly   655 IGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQD------GFPRW 713

Mouse   442 VMTG------VICFACFLSAICF----TLQSGGYWLEIFDSFAASLNLIIFAFMEVVGVIHIYGM 496
            :...      |:.|.|.:|.: |    .:|.|.|:.::.|.:|||:.::..||.:::.:...||.
  Fly   714 IKRHLGYHEIVVLFVCVISCL-FGMPNIIQGGIYYFQLMDHYAASVTIMFLAFCQMIAIAWFYGT 777

Mouse   497 KRFCDDIEWMTGRRPGLYWQVTWRVVSPMLLFGIFLSYIVLLIQTPPSYKAWNPQYEHFPSREEK 561
            .|...:::.|||:.|..|.:..|.|:.|.|||.|::  :.|:....|:|.  |.:|.        
  Fly   778 GRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWV--LSLINYHEPTYH--NGRYT-------- 830

Mouse   562 FYPGWVQVTCVLLSFLPSLWVPGVALAQLL 591
             ||.|......:.:....:.:||.|:...|
  Fly   831 -YPDWAYGIGWMFASFSLICIPGYAVINFL 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a18NP_001035782.1 SLC6sbd_B0AT3 16..591 CDD:212086 197/605 (33%)
ineNP_477012.1 SLC5-6-like_sbd 337..876 CDD:444915 196/599 (33%)

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