DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc6a18 and ine

DIOPT Version :9

Sequence 1:NP_001035782.1 Gene:Slc6a18 / 22598 MGIID:1336892 Length:615 Species:Mus musculus
Sequence 2:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster


Alignment Length:615 Identity:201/615 - (32%)
Similarity:311/615 - (50%) Gaps:107/615 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse     8 DPLVDIEDE----RPK---WDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVF 65
            |..:|:.||    :|:   |.||:|::|:|||::|||||:|||||:|...|||.||:||.|.|..
  Fly   321 DSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFI 385

Mouse    66 EGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQ 130
            ..|||.::||::||...||.||....:.|...|.||....||||:|.||:.::.:.:::|..||:
  Fly   386 CSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFK 450

Mouse   131 HPLPWSTCPLDLNRTGFVQEC-------------QSSGTVS-YFWYRQTLNITSDISNTGTIQWK 181
            ..:||    :|.|......:|             .:|.|.| .|:..:.|.|:..:...|.::|:
  Fly   451 TEMPW----IDCNNRWNTPDCWVPQRKGINASAPDTSRTPSEEFFENKVLQISGGLEYPGMMRWE 511

Mouse   182 LFLCLVACWSTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLIYLFTPNMKT 246
            ||.||:..|..||....:.|:|:.||.||||.||::::.|.::|.:||.||.|||.:.|.|....
  Fly   512 LFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSE 576

Mouse   247 LQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASIAIFSVMG 311
            |:|..||::||:|.|.||.:.||..|:|||||...||..:|.|.::.||.:|||...|..||.:|
  Fly   577 LKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLG 641

Mouse   312 FKASNDYGRCLDRNILSLINEFDLPELSISRDEYPSVLMYLNATQTARVAQLPLKTCHLEDFLDK 376
            ..|       |::|                                             .:..|.
  Fly   642 NLA-------LEQN---------------------------------------------TNVRDV 654

Mouse   377 SASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLLDMGILPKGIPKE 441
            ...|||:.|:|:.:|:..||.|.:|:|:||.||..|||:|.|..:|.|:|.:.|      |.|:.
  Fly   655 IGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQD------GFPRW 713

Mouse   442 VMTG------VICFACFLSAICF----TLQSGGYWLEIFDSFAASLNLIIFAFMEVVGVIHIYGM 496
            :...      |:.|.|.:|.: |    .:|.|.|:.::.|.:|||:.::..||.:::.:...||.
  Fly   714 IKRHLGYHEIVVLFVCVISCL-FGMPNIIQGGIYYFQLMDHYAASVTIMFLAFCQMIAIAWFYGT 777

Mouse   497 KRFCDDIEWMTGRRPGLYWQVTWRVVSPMLLFGIFLSYIVLLIQTPPSYKAWNPQYEHFPSREEK 561
            .|...:::.|||:.|..|.:..|.|:.|.|||.|::  :.|:....|:|.  |.:|.        
  Fly   778 GRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWV--LSLINYHEPTYH--NGRYT-------- 830

Mouse   562 FYPGWVQVTCVLLSFLPSLWVPGVALAQLL 591
             ||.|......:.:....:.:||.|:...|
  Fly   831 -YPDWAYGIGWMFASFSLICIPGYAVINFL 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a18NP_001035782.1 SLC6sbd_B0AT3 16..591 CDD:212086 197/605 (33%)
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 196/599 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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