DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kcng3 and Shawl

DIOPT Version :9

Sequence 1:NP_705732.1 Gene:Kcng3 / 225030 MGIID:2663923 Length:433 Species:Mus musculus
Sequence 2:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster


Alignment Length:527 Identity:152/527 - (28%)
Similarity:221/527 - (41%) Gaps:133/527 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse     7 GAASVVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAFG 71
            |...::|||.|.||...:..||..|..|:|||         .|...:||...||||||||...|.
  Fly     3 GENRIILNVSGIRYETYKATLKKIPATRLSRL---------TEALANYDPVLNEYFFDRHPGVFT 58

Mouse    72 FILLYVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRMSDTHTFHAADELGREQ 136
            .||.|.| .|||.:...:|...|..|:.:|||:...:|.||...........:|....|:|..|.
  Fly    59 QILNYYR-TGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIEN 122

Mouse   137 PRPA--------GPEAAPSRRWLERMRR-------TFEEPTSSLAAQILASVSVVFVIVSMVVLC 186
            .:|.        |.|.|.|...|...:|       .|:||:||..|:|:|.:||.|:.||::..|
  Fly   123 EKPTEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFC 187

Mouse   187 ASTLPDWR-------------------------------------------AAVADNRSLDDRSR 208
            ..|.|.:|                                           .::.....:.:.:.
  Fly   188 LKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTS 252

Mouse   209 YS---------ASP---------------------------------GREPSG------------ 219
            ||         |:|                                 ||...|            
  Fly   253 YSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAF 317

Mouse   220 -IIEAICIGWFTAECIVRFIVSKNKCEFVKRPLNIIDLLAITPYYISVLMTVFTGENSQLQRAGV 283
             .:|.:|..||..|.|:|.|||.|..:|:|.|:||||..|...:|..|:..:  ||.:.|..|  
  Fly   318 FYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVMQRM--GEYTGLLEA-- 378

Mouse   284 TLRVLRMMRIFWVIKLARHFIGLQTLGLTLKRCYREMAMLLVFICVAMAIFSALSQLLEHGLDLE 348
             ..::|:||:|   ||.||..||:.|..|.|...:|:.:|:.|:.:.:..|::|:...|...|  
  Fly   379 -FSIVRIMRLF---KLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQD-- 437

Mouse   349 TSNKDFASIPAACWWVIISMTTVGYGDMYPITVPGRILGGVCVVSGIVLLALPITFIYHSFVQCY 413
            ..:..|.|||...||.|::||||||||:.|.|.||..:|.:|.::|::.:|||:..|..:|...|
  Fly   438 NPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFY 502

Mouse   414 HELKFRS 420
            ...:.||
  Fly   503 SHTQARS 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcng3NP_705732.1 BTB 11..119 CDD:197585 41/107 (38%)
BTB 11..111 CDD:295341 39/99 (39%)
Ion_trans 216..417 CDD:278921 74/213 (35%)
Ion_trans_2 <360..405 CDD:285168 21/44 (48%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375 4/4 (100%)
ShawlNP_001097131.2 BTB 7..99 CDD:197585 40/101 (40%)
BTB_2 7..97 CDD:280393 39/99 (39%)
Ion_trans 307..506 CDD:278921 73/208 (35%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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