DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FGA and sca

DIOPT Version :10

Sequence 1:NP_000499.1 Gene:FGA / 2243 HGNCID:3661 Length:866 Species:Homo sapiens
Sequence 2:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster


Alignment Length:915 Identity:199/915 - (21%)
Similarity:332/915 - (36%) Gaps:271/915 - (29%)


- Green bases have known domain annotations that are detailed below.


Human     6 IVCLVLSVVGTAWTADSGEGDFLAE--GGGVRGPRVVERHQSAC---KDSDWP--------FCSD 57
            ::.:||..:..|:.:.:..|..:..  ...:|..:||...:...   ::::.|        |..|
  Fly    36 LLAVVLLQISVAFVSGAASGGVVLSDVNNMLRDAKVVTSEKPVVHSKQETEAPESSVELLRFVDD 100

Human    58 EDWNYKCPSGCRMKG-------LIDEVNQDFTNRINKL---KNSLFEYQKNN-KDSHSLTTNIME 111
            ::.:....|..|..|       :.|:|.. .|.::|.|   :...:|..::| :.|..||||.  
  Fly   101 DEDSEDISSIERQDGRTMESKKMADQVRL-LTKQLNALMLRRREDYEMLEHNLRKSLRLTTNA-- 162

Human   112 ILRGDFSSANNRDNTYNRVSEDLRSRIEVLKRKVIE------------KVQHIQLLQKNVRAQLV 164
                            |.|..|:||.:..|:.::..            .|:.:|.....:|.|||
  Fly   163 ----------------NSVDADMRSELNQLREELAALRSSQSGNKERLTVEWLQQTISEIRKQLV 211

Human   165 DMKRLEVDI--DIKIRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSRDRQHLPLIKMK 227
            |::|...::  |::.||         :...||.......:||:    .||...|:||....:.::
  Fly   212 DLQRTASNVAQDVQQRS---------STFEDLATIRSDYQQLK----LDLAAQRERQQQTEVYVQ 263

Human   228 PVPDLVPGNFKSQLQKVPPEWKALTDMPQMRMELERPGGNEITRGGSTSYGTGSETESPRNPSSA 292
            .:.:       ..||:......||..:.|.                                   
  Fly   264 ELRE-------EMLQQEQDFQHALVKLQQR----------------------------------- 286

Human   293 GSWNSGSSGPGSTGNRNPGSSGTGGTATWKPGSSGPGSTGSWNSGSSGTG--STGNQNPGSPRPG 355
                          .|..|||           :|....:||..:....||  :|.:......|..
  Fly   287 --------------TRKDGSS-----------ASVEEESGSQEANQEQTGLETTADHKRRHCRFQ 326

Human   356 STGTWNPGSSER-------GSAGHWTSESSVSGSTGQWHSESGSFRPDSPGSGNARPNNPDWGTF 413
            |........::|       |...|...|...|....|....:.:|                    
  Fly   327 SEQIHQLQLAQRNLRRQVNGLRFHHIDERVRSIEVEQHRIANANF-------------------- 371

Human   414 EEVSGNVSPGTRREYHTEKLVTSKGDKELRTGKEKVTSGSTTTTRRSCSKTVTKTVIGPDGHKEV 478
             .:|..::  :..:.||..|...:..:.|:|..:|    |....|...||.       ...:.::
  Fly   372 -NLSSQIA--SLDKLHTSMLELLEDVEGLQTKMDK----SIPELRHEISKL-------EFANAQI 422

Human   479 TKE-VVTSEDGSDCPEAMDLGTLSGIGTLDGFRHRHPDEAAFFDTASTGKTFPGFFSPMLGEFVS 542
            |.| .:..|:|::...::....:| :..|...|......:|..|...|.       ...|...|:
  Fly   423 TSEQSLIREEGTNAARSLQAMAVS-VSVLQEEREGMRKLSANVDQLRTN-------VDRLQSLVN 479

Human   543 ETESRGSESGIFTNTKESSSHHPGI-AEFPSRGKSSSYSKQFTSSTSYNRGDSTFESKSYKMADE 606
            : |.:...:.:  |......||..: |:.|                   :.||..:|   .:|:.
  Fly   480 D-EMKNKLTHL--NKPHKRPHHQNVQAQMP-------------------QDDSPIDS---VLAET 519

Human   607 AGSEADHEGTH----STKRGHAKSRPVRDCDDVLQTHPSGTQS-GIFNIKLPGSSKIFSVYCDQE 666
            ..||.::..|.    ..|..|       ||.:|   |   ||: |:..|...|.......:|..:
  Fly   520 LVSELENVETQYEAIINKLPH-------DCSEV---H---TQTDGLHLIAPAGQRHPLMTHCTAD 571

Human   667 TSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDEGEGEFWLGNDYLHLLT-QRGSVLRVELED 730
                ||..:|:|.|||.:|||:|.||.:|||:..    ||||:||:.||.|| ...|.|:|:::|
  Fly   572 ----GWTTVQRRFDGSADFNRSWADYAQGFGAPG----GEFWIGNEQLHHLTLDNCSRLQVQMQD 628

Human   731 WAGNEAYAEY-HFRVGSEAEGYALQVSSYEGTAGDALIEGSVEEGAEYTSHNNMQFSTFDRDADQ 794
            ...|...||| .|.:.|.|:||.|.::.|.|.|.|||   :.::|        ||||..|.|.|.
  Fly   629 IYDNVWVAEYKRFYISSRADGYRLHIAEYSGNASDAL---NYQQG--------MQFSAIDDDRDI 682

Human   795 WEENCAEVYGGGWWYNNCQAANLNGIYYPGGS-YDPRNNSPYEIENGVVWVSFRGADYSLRAVRM 858
            .:.:||..|.||||:::||.|||||.|..|.: :|...|.         |:       ::::.||
  Fly   683 SQTHCAANYEGGWWFSHCQHANLNGRYNLGLTWFDAARNE---------WI-------AVKSSRM 731

Human   859 KIRPL 863
            .::.|
  Fly   732 LVKRL 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FGANP_000499.1 Alpha-chain polymerization, binding distal domain of another fibrin gamma chain 36..38 0/1 (0%)
Fib_alpha 49..191 CDD:462570 35/174 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..460 28/206 (14%)
Fibrinogen_aC 445..509 CDD:432370 11/64 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 543..638 18/99 (18%)
FReD 630..863 CDD:238040 85/236 (36%)
scaNP_476710.2 PRK03918 134..>485 CDD:235175 83/491 (17%)
FBG 538..736 CDD:214548 86/245 (35%)

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