DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and Abl

DIOPT Version :10

Sequence 1:XP_011541571.1 Gene:FER / 2241 HGNCID:3655 Length:837 Species:Homo sapiens
Sequence 2:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster


Alignment Length:485 Identity:171/485 - (35%)
Similarity:255/485 - (52%) Gaps:65/485 - (13%)


- Green bases have known domain annotations that are detailed below.


Human   376 KFSAQKELLEQKVQENDGKEPPP--VVNYEEDARSVTSMERKERLSKFESIRHSIAGIIRSPKSA 438
            ::::::.||....:|:|    |.  |..|:..|..    |.:..|.|.|.:|     |:...||.
  Fly   190 RWTSKENLLAPGPEEDD----PQLFVALYDFQAGG----ENQLSLKKGEQVR-----ILSYNKSG 241

Human   439 LGSSALSDMISISEKP---------LAEQDWYHGAIPRIEAQELLKK--QGDFLVRESHGKPGEY 492
            ....|.||..::...|         |.:..||||.|.|..|:.||..  .|.||||||...||:.
  Fly   242 EWCEAHSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQR 306

Human   493 VLSVYSDGQRRHFIIQYVDN--MYRFEGTGFSNIPQLIDHHYTTKQVITKKSGVV--LLNPIPKD 553
            .:|:..:|:..|:.|....:  ::..:...|:.:.:|:.||    .|..:..|::  ||.|.||.
  Fly   307 SISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHH----SVPHEGHGLITPLLYPAPKQ 367

Human   554 KK------------WILSHEDVILGELLGKGNFGEVYKGTLKD-KTSVAVKTCKEDLPQELKIKF 605
            .|            |.:...|:::...||.|.:||||:...|. ..:|||||.||| ...|| .|
  Fly   368 NKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKED-TMALK-DF 430

Human   606 LQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVSGGDFLTFLRRK-KDELKLKQLVKFSLDAA 669
            |:||.|:|:..|||:|:||||||:..|.|||.|.:|.|:.|.|||.. ::.|....|:..:...|
  Fly   431 LEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIA 495

Human   670 AGMLYLESKNCIHRLCEGKGEMKETSNLGDLAARNCLVGENNVLKISDFGMSRQEDGGVYSSSGL 734
            :||.||||:|.|||               ||||||||||:|.::|::|||::|......|::...
  Fly   496 SGMSYLESRNYIHR---------------DLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAG 545

Human   735 KQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQAREQVERGYRMSAPQH 799
            .:.||||||||.|.|.::|::||||:||:||||..:.|:.|||.:.......::::||||..|..
  Fly   546 AKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERPPG 610

Human   800 CPEDISKIMMKCWDYKPENRPKFSELQKEL 829
            ||.::..:|.:||.:...:||.|..:...|
  Fly   611 CPPEVYDLMRQCWQWDATDRPTFKSIHHAL 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERXP_011541571.1 F-BAR_Fer 5..238 CDD:153370
SMC_prok_B 107..>393 CDD:274008 3/16 (19%)
SH2_Fps_family 453..538 CDD:198224 28/97 (29%)
Protein Kinases, catalytic domain 566..831 CDD:473864 114/266 (43%)
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 15/62 (24%)
SH2_ABL 268..363 CDD:198189 30/98 (31%)
PTKc_Abl 382..644 CDD:270645 116/276 (42%)
FABD 1584..1723 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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