| Sequence 1: | NP_033530.2 | Gene: | Vdr / 22337 | MGIID: | 103076 | Length: | 422 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_524493.1 | Gene: | Hr96 / 42993 | FlyBaseID: | FBgn0015240 | Length: | 723 | Species: | Drosophila melanogaster |
| Alignment Length: | 740 | Identity: | 142/740 - (19%) |
|---|---|---|---|
| Similarity: | 221/740 - (29%) | Gaps: | 368/740 - (49%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 21 PRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCV 85
Mouse 86 DIGMMKEFILTDEEVQRKREMI------------------------------------------- 107
Mouse 108 --------------------------------------------------------MKRKEEEAL 116
Mouse 117 ----------KDSLR--------------------------------------------PKLSEE 127
Mouse 128 QQHIIAILLDAHHKTYD-----------PTYA--------------------------------- 148
Mouse 149 -----------------------------DFRDFRPPIRADVSTGSYSPRPTLSFSGDSSSNSDL 184
Mouse 185 YT-----PSLD--------------------------------MMEPASFSTM------------ 200
Mouse 201 -------------------DLNE-------------EGSDDPSVTLDLSPLSM------------ 221
Mouse 222 ---LPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTLDDMSWDC 283
Mouse 284 GSQDYKYDITDVSRAGHTLE----LIEPLIKFQVGLKKLNLHEE---------------EHVLLM 329
Mouse 330 --AICIVSPDRPGVQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEH 392
Mouse 393 SKQYRSLSFQPENSMKLTPLVLEVF 417 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Vdr | NP_033530.2 | NR_DBD_VDR | 16..122 | CDD:143513 | 55/253 (22%) |
| Hinge | 97..126 | 12/181 (7%) | |||
| NR_LBD_VDR | 124..421 | CDD:132731 | 86/484 (18%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 161..185 | 7/23 (30%) | |||
| Vitamin D3 binding. /evidence=ECO:0000250 | 222..232 | 3/9 (33%) | |||
| Interaction with coactivator LXXLL motif. /evidence=ECO:0000250 | 241..259 | 8/17 (47%) | |||
| Vitamin D3 binding. /evidence=ECO:0000250 | 266..273 | 2/6 (33%) | |||
| 9aaTAD. /evidence=ECO:0000250|UniProtKB:P11473 | 411..419 | 4/7 (57%) | |||
| Hr96 | NP_524493.1 | NR_DBD_CAR | 5..98 | CDD:143524 | 47/92 (51%) |
| NR_LBD | 462..>573 | CDD:299703 | 29/111 (26%) | ||
| NR_LBD_F1 | 523..702 | CDD:132727 | 47/197 (24%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167847959 | |
| Domainoid | 1 | 1.000 | 99 | 1.000 | Domainoid score | I7064 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 171 | 1.000 | Inparanoid score | I4095 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D153746at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR24082 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6384 |
| SonicParanoid | 1 | 1.000 | - | - | X988 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 9 | 9.030 | |||||