Protein Alignment Vax1 and Scr

DIOPT Version :10

• Sequence 1: NP_033527.1
• Gene: Vax1 / 22326
• MGIID: 1277163
• Length: 338
• Species: Mus musculus
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 315
• Identity: 83/315 - (26%)
• Similarity: 113/315 - (35%)
• Gaps: 96/315 - (30%)

Mouse    18 AARVSKNAHKESREIKGAEGSLPAAFLKEPQGAFSGS--------GASEDCNKSKSNSSADPDYC 74
            ||....|.:.....:.|..|::... :..|.|..|.|        |:|::....|.|......:.
  Fly   245 AAAAGLNNNHSGSGVSGGPGNVNVP-MHSPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWM 308

Mouse    75 RRILVR----DAKGSIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELAR 135
            :|:.:.    :|.|              ..||.|||:|..|...||.||...:|:..|.|.|:|.
  Fly   309 KRVHLGTSTVNANG--------------ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 359

Mouse   136 QLNLSETQVKVWFQNRRTKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLPPC 200
            .|.|:|.|:|:||||||.|.||:            ...|:.:::                   |.
  Fly   360 ALCLTERQIKIWFQNRRMKWKKE------------HKMASMNIV-------------------PY 393

Mouse   201 ATGALGSALR----GPS----LPALGAGAAAGSAA-----------AAAAAAAATA-----PGPA 241
            ..|..|....    .||    |.| .|...:|:.            .||||:||:.     .||.
  Fly   394 HMGPYGHPYHQFDIHPSQFAHLSAXDAWHFSGTGXRLNQLYQEPYQTAAAASAASGYQSQDGGPI 458

Mouse   242 GAASQHQPAVGGAPGPGPAGPGGLHAGAPTASHGLFSLPVPSLLGSVASRLSSAP 296
            |..|  ....|||.|||....||.:...|.           ||..|.||. |.||
  Fly   459 GGGS--VGVGGGAGGPGSLANGGSNGSGPN-----------SLFASAASS-SQAP 499

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vax1	NP_033527.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..69		13/58 (22%)
		Homeodomain	101..157	CDD:459649	28/55 (51%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	239..269		12/29 (41%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	318..338
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	28/55 (51%)