DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vax1 and Dfd

DIOPT Version :10

Sequence 1:NP_033527.1 Gene:Vax1 / 22326 MGIID:1277163 Length:338 Species:Mus musculus
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:223 Identity:59/223 - (26%)
Similarity:93/223 - (41%) Gaps:49/223 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse    57 SEDCNKSKSNSSADPD--------------YCRRILVRD-AKGSIREIILPKGLDLDRPKRTRTS 106
            |.|.:....:|.:|.|              :.::|.|.. |.||.:     .|::   |||.||:
  Fly   316 SNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQ-----PGME---PKRQRTA 372

Mouse   107 FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD------------- 158
            :|..|:..||.||...:|:..|.|.|:|..|.|||.|:|:||||||.|.|||             
  Fly   373 YTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKT 437

Mouse   159 ---QGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLPPCATGALGSALRGPSLPALG-A 219
               .|..:.:....::.||:....:..:|.:....       ....|..:...:|..||.::| .
  Fly   438 VDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQ-------QTQQTPVMNECIRSDSLESIGDV 495

Mouse   220 GAAAGSAAAAAAAAAATAPGPAGAASQH 247
            .::.|:.....||...|:..|  .:.||
  Fly   496 SSSLGNPPYIPAAPETTSSYP--GSQQH 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vax1NP_033527.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 3/11 (27%)
Homeodomain 101..157 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..269 3/9 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..338
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 28/55 (51%)
Blue background indicates that the domain is not in the aligned region.

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