DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vax1 and CG34031

DIOPT Version :10

Sequence 1:NP_033527.1 Gene:Vax1 / 22326 MGIID:1277163 Length:338 Species:Mus musculus
Sequence 2:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster


Alignment Length:180 Identity:53/180 - (29%)
Similarity:79/180 - (43%) Gaps:40/180 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 GKPDKMDVRCHSDTEAARVSKNA-HKESREIKGAEGSLPAAFLKEPQGAFSGSGASEDCNKSKSN 66
            ||.....:.....|..|..|:|: .|::..:..::.|...||          |...|..||:...
  Fly    26 GKLGAFSIDSILSTSEAHSSQNSLPKDNTNVTSSDISKLYAF----------SFTQEGNNKTPLT 80

Mouse    67 SSADPDYC----RRILVRDAKGSI------REIILPKGLD--------------LDRPKRTRTSF 107
            :.   |.|    ||:.:.....::      .|.|||..:.              .||  :.|.::
  Fly    81 NF---DLCQGHPRRLPITFDGSTVSRFVWRTESILPSYITNSTNLQEKQLRKRFTDR--KPRQAY 140

Mouse   108 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK 157
            :|.||.|||.||...:|:...:|.||::.|:|:|.|||.||||||||.||
  Fly   141 SASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKK 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vax1NP_033527.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 14/66 (21%)
Homeodomain 101..157 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..269
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..338
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 28/57 (49%)
Blue background indicates that the domain is not in the aligned region.

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