Protein Alignment Vax1 and B-H2

DIOPT Version :10

• Sequence 1: NP_033527.1
• Gene: Vax1 / 22326
• MGIID: 1277163
• Length: 338
• Species: Mus musculus
• Sequence 2: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Alignment Length: 293
• Identity: 82/293 - (27%)
• Similarity: 116/293 - (39%)
• Gaps: 86/293 - (29%)

Mouse    21 VSKNAHKESREIKGAEGSLPAAFLKEPQGAFSGSGA-------SEDC--------NKSKSNSSAD 70
            :|.|:...:.......|::   .|..|..:.||..|       |:||        :..|:.|||:
  Fly   304 ISGNSSSSNNNNGSGNGNM---LLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSAN 365

Mouse    71 PDYCRRILVRDAKGSIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELAR 135
            .|....:.:..:|               :.::.||:||..||..||..|:|.:|:..::|.|||.
  Fly   366 GDSSSHLSLSLSK---------------KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELAN 415

Mouse   136 QLNLSETQVKVWFQNRRTKQKKDQGKDSEL-----------------------------RSVVSE 171
            :|.||:.|||.|:||||||.|:......||                             .:..|.
  Fly   416 KLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSP 480

Mouse   172 TAATCSVL----RLLEQGRLLSPPGLPA-------LLPPCATGALGSALRG-PSLPALGAGAAAG 224
            ..||.|.:    |.......:..|.|||       .:||      |.:|.| |:.|..||.....
  Fly   481 HGATPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSIPP------GMSLPGMPAPPPPGAAPMLS 539

Mouse   225 SAAAAAAAAAATAPGPAGAASQHQ--PAVGGAP 255
            ...||||||||:    |||..|.|  ||...:|
  Fly   540 GYYAAAAAAAAS----AGAQQQQQQPPAASRSP 568

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vax1	NP_033527.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..69		13/62 (21%)
		Homeodomain	101..157	CDD:459649	28/55 (51%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	239..269		8/19 (42%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	318..338
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	28/55 (51%)