DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vars and GstD6

DIOPT Version :9

Sequence 1:NP_035820.3 Gene:Vars / 22321 MGIID:90675 Length:1263 Species:Mus musculus
Sequence 2:NP_524915.1 Gene:GstD6 / 48339 FlyBaseID:FBgn0010042 Length:215 Species:Drosophila melanogaster


Alignment Length:140 Identity:35/140 - (25%)
Similarity:48/140 - (34%) Gaps:52/140 - (37%)


- Green bases have known domain annotations that are detailed below.


Mouse   117 PALGLRGPGQDPQAALGALGKALNPLEDWLRLHTYLAGDAPTLAD---LAAV-TALLLPFRYVLD 177
            |.|....||  .|..|..|..|.:.|.::|....|:||:..::||   ||.| |..::.|.....
  Fly   114 PLLRTGKPG--TQENLEKLNAAFDLLNNFLDGQDYVAGNQLSVADIVILATVSTTEMVDFDLKKF 176

Mouse   178 PSARRIWGNVTRWFNTCVRQPEFRAVLGEVALYSGARSVTQQPGSEVIAPQKTPAQLKKEAKKRE 242
            |       ||.||                   |..|:.||  ||.:                  |
  Fly   177 P-------NVDRW-------------------YKNAQKVT--PGWD------------------E 195

Mouse   243 KLEKFQQKQK 252
            .|.:.|..:|
  Fly   196 NLARIQSAKK 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VarsNP_035820.3 GST_C_family 92..213 CDD:383119 26/99 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..294 6/35 (17%)
PTZ00419 281..1263 CDD:240411
'HIGH' region 343..353
'KMSKS' region 861..865
GstD6NP_524915.1 GST_N_Delta_Epsilon 1..74 CDD:239343
PLN02395 11..208 CDD:166036 35/140 (25%)
GST_C_Delta_Epsilon 88..204 CDD:198287 34/137 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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