DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vars1 and eEF1gamma

DIOPT Version :10

Sequence 1:NP_035820.3 Gene:Vars1 / 22321 MGIID:90675 Length:1263 Species:Mus musculus
Sequence 2:NP_652000.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster


Alignment Length:469 Identity:127/469 - (27%)
Similarity:188/469 - (40%) Gaps:106/469 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 LYVSPHPDAFPSLRALIAARYGEA----GDGPGWGGPHPRICLQPPPSSR--TPFPPPRLPALEQ 62
            ||.  :|:.|.:.:|||||:|..|    .|...:|        :...|:.  ..||..::||.|.
  Fly     6 LYT--YPENFRAYKALIAAQYSGAQVKVADNFKFG--------ETNKSAEFLKKFPGGKVPAFET 60

Mouse    63 GPGGLWVWGAPAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALGLRGPGQD 127
            .. |.::..:.|:|.||....|.|.........||||:|:||.|::||:|....|.||:. |.|.
  Fly    61 AE-GQYLSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLGIL-PQQK 123

Mouse   128 PQAALGALGKALNPLEDWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLDPSARRIWGNVTRWFN 192
            ...|.......|..|...|:..|:|||:..||||:...::||..:.|||:||.|..:|||.|||.
  Fly   124 NSTAKQEAEAVLQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFV 188

Mouse   193 TCVRQPEFRAV-----LGEVALYSGARSVTQ-QPGSEVIAPQKTPAQLKKEAKKREKLEKFQQKQ 251
            |.:.|.:.:||     |.|.||....:...: |..:....||:...|.|:|.|.:||.|..::..
  Fly   189 TILNQKQVQAVVKDYKLCEKALVFDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAPKKAA 253

Mouse   252 KTQQQPPHGEKKPKPEKKEKRDP------GVITYDLPTPPGEKKDVSGAMPDSYSPQYVEAAWYP 310
            :..::....::....|.|.| ||      |...:|........:|.:.::|  |.....:|..|.
  Fly   254 EPAEELDAADEALAAEPKSK-DPFDALPKGTFNFDDFKRVYSNEDEAKSIP--YFFDKFDAENYS 315

Mouse   311 WWERQGFFKPEYGRPSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMR----- 370
            .|..:..:..|..:          |||.|                 |.|.....|..:||     
  Fly   316 IWFGEYKYNEELSK----------VFMSC-----------------NLITGMFQRLDKMRKAAFA 353

Mouse   371 --------GETTLWNPGCDHAGIATQVVVEKKLWKERGLNRHQLGREAFL--------EEVWKWK 419
                    |.:|:       :||          |..||.:.      ||.        .||:.||
  Fly   354 SVCLFGEDGNSTI-------SGI----------WVWRGQDL------AFTLSPDWQIDYEVYDWK 395

Mouse   420 AEKGDRIYHQLKKL 433
              |.|....:.|||
  Fly   396 --KLDAKSEETKKL 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vars1NP_035820.3 GST_C_family 92..213 CDD:470672 50/125 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..294 18/82 (22%)
PTZ00419 281..1263 CDD:240411 34/174 (20%)
'HIGH' region 343..353 0/9 (0%)
'KMSKS' region 861..865
eEF1gammaNP_652000.1 GST_N_EF1Bgamma 4..79 CDD:239342 24/83 (29%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 48/119 (40%)
EF1G 273..376 CDD:459888 28/149 (19%)
Blue background indicates that the domain is not in the aligned region.

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