Sequence 1: | XP_017169419.1 | Gene: | Cdh23 / 22295 | MGIID: | 1890219 | Length: | 3361 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477497.1 | Gene: | ft / 33627 | FlyBaseID: | FBgn0001075 | Length: | 5147 | Species: | Drosophila melanogaster |
Alignment Length: | 3679 | Identity: | 1015/3679 - (27%) |
---|---|---|---|
Similarity: | 1562/3679 - (42%) | Gaps: | 702/3679 - (19%) |
- Green bases have known domain annotations that are detailed below.
Mouse 50 LISEDTPVGSSVTQLLARDMD---NDPLVFGV-SGEEASRFFAVEPDTGVVWLRQPLDRETKSEF 110
Mouse 111 TVEFSVSDHQGVITRK-----VNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDL 170
Mouse 171 GAGGSVLYSFQPP----SPF-FAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLAN 230
Mouse 231 LAIIITDMQDMDPIFINLPYSTNIYEHSPPGTTVRV------------ITAVDQDKGRPRGIGYT 283
Mouse 284 IVSGNTNSIFALDYISGALTLNGLLDRENPLYSH---GFILTVKGTELNDDRTPSDATVTTTF-- 343
Mouse 344 NILVID-------------INDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEV 395
Mouse 396 YLV-GNNSHHFIISPTSVQGKADIRIRVAIPLDYETVDRYDFDLFANES-----VPDHVGYAK-- 452
Mouse 453 VKITLINENDNRPIF-----SQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPD- 511
Mouse 512 RFSLDKDTGLIMLIARLDYELIQRFTLTVIARDGGGEETTGRVRINVL--DVNDNVPTFQKDAYV 574
Mouse 575 GALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASA---FGSYFDISIYEGYGVISVSRPLDY 636
Mouse 637 EQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIMAGATVLFLN 701
Mouse 702 ATDLDRSREYGQESIIYSLEGSSQ-FRINARSGEITTTSLLDRET-------------------- 745
Mouse 746 -KSEYILIVRAV-DGGVGHNQKTGIATVNVTLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTVV 808
Mouse 809 AVDPDLGENGTLVYSIHPPNKF--YSLNSTTGKIRTTHVMLDRENPDPVEAELMRKIIVSVTDCG 871
Mouse 872 RPPLKATSSATVFVNLLDLNDNDPTFRNLPFVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRM 936
Mouse 937 QVGMPRMDFVINSTSGVVTTTAELDRERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPT 1001
Mouse 1002 FFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGN---VDGK-FSVGYRDAVVRTV 1062
Mouse 1063 VGLDRETTAAYTLVLEAIDNGPVGKRRTGT-ATVFVTVLDVNDNRPIFLQSSYEASVPE-DIPEG 1125
Mouse 1126 HS--IVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLLMRGPRP---------------- 1172
Mouse 1173 --LDRERNSSHVLM--------------------------------------------------- 1184
Mouse 1185 -------------------------------------------VEAYNHDLG--PMRSSVRVIVY 1204
Mouse 1205 VEDVNDEAPVF--TQQQYNRLGLRETAGIGTSVIVVRATDKDTGDGGLVNYRILSGAEGKFEIDE 1267
Mouse 1268 STGLIVTVDYLDYETKTSYLMNVSATDGAPPFNQGFCSVYVTLLNELDEAVQFSNASYEAVIMEN 1332
Mouse 1333 LALGTEIVRVQAYSID--NLNQITYRFDAYTSAQAKALFKIDAITGVITVKGLVDREKGDFYTLT 1395
Mouse 1396 VVADDGG-PKVDSTVKVYITVLDENDNSPRFDFTSDSAISVPEDCPVGQRVATVKARDPDAGSNG 1459
Mouse 1460 QVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDREELDHYILKVVASD---------------- 1508
Mouse 1509 --RGTPPRKKDHILQ----------------VTIL--DVNDNPPVIESPFGYNVSVNENVGGGTS 1553
Mouse 1554 VVQVRATDRDIGINSVLSYYITEG-NEDM------TFRMDRISGEIATRPAPPDRERQNFYHLVV 1611
Mouse 1612 TVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINTSLITVQALDLDEGPNGT 1676
Mouse 1677 VTYAIVAGNIINTFRINKHTGVITAAKELDYEISHGRYTLIVTATDQCPILSHRLTSTTTVLVNV 1741
Mouse 1742 NDINDNVPTFPRDYEGPF-----DVTEGQPGPRVWTFLAHDRDSGP-NGQVEYSVVDGDPLGEFV 1800
Mouse 1801 ISPVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNV 1865
Mouse 1866 TISENSPVSSFVAHVLASDADSGCNALLTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEYR 1930
Mouse 1931 LTVSVKDNP-ENPRIARKDFDLLLVSLADENDNHPLFTEGTYQAEVMENSPAGTPLTVLNGPIL- 1993
Mouse 1994 ---ALDADEDVYAVVTYQLLGTHSDLFVIDNSTGVVT---------------------------- 2027
Mouse 2028 -----------------------------------VRSGIIIDR-EAFSP--------------- 2041
Mouse 2042 ---------PFLELLLLAEDIGQLNGTAHLF---------------------ITILDDNDNWPTF 2076
Mouse 2077 SPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNATIDR 2141
Mouse 2142 EEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTIIANVTAI 2206
Mouse 2207 DLDL--NPKLEYHIISIVAKDDTDRLVPDQEDAFAVNINTGSVMVKSPLNRELVATYEVTLSVID 2269
Mouse 2270 NA--SDLPEHSVSVPNAKLTVNILDVNDNTPQFKPFGITYYTERVLEGATPGTTLIAVAAVDPDK 2332
Mouse 2333 -GLNGLITYTLLDLTPPGYVQLEDSSAGKVIANRTVDYEEVHWLN-------FTVRASDNGSPPR 2389
Mouse 2390 AAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLV--DGE 2452
Mouse 2453 GKFAINPNTGDISVLSSLDREKKDHYILTALAKDN---PGDVASNRRENSVQVVIRVLDVNDCRP 2514
Mouse 2515 QFSKPQFSTSVYENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEA--FSVDMDSGLVTTQRP 2577
Mouse 2578 L--QSYERFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILH--IKEEIPLRSN 2638
Mouse 2639 VYEVYATDNDEGLNGAVRYSFLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASDL 2703
Mouse 2704 GQPVPYETMQP---LQVALEDIDDNEPLFVRPPKGSPQYQLLTVPEHSPRGTLVGNVTGAVDADE 2765
Mouse 2766 GPNAIVYYFIAAGDEDKNFHLQPD-GRLLVLRDLDRETEATFSFIVKASSNRSWTPPRGPSPALD 2829
Mouse 2830 LLTDLTLQEVRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALDADI-GNNSLVFYGIL 2893
Mouse 2894 AIHYFRALANDSEDVGQVFTMGSVDG--------ILRTFDLFMAYSPGYFVVDIVARDLAGHNDT 2950
Mouse 2951 AI---IGIYILRDD---QRVKIVINEIPDRVRG---FEEEFI----------------------- 2983
Mouse 2984 -RLLSNITGAIVNTDDVQFHVDMKGRVNFAQTELLIHVV-----NRDTNRILDVDRVIQMIDENK 3042
Mouse 3043 EQLRNLFRNYNVLDVQP---------AISVQLPDDMSALQMAIIVLAILLFLAAMLFVLMNWYYR 3098
Mouse 3099 TIHKRKLKAIVA--GSAGNRGFIDIMDMPNTNKYSFDG---ANPVWLDPFCRNLELAAQAEHEDD 3158
Mouse 3159 LPENLSEIADLWNSPTRTHGTFGREPAAVKPDDDRYLRAAIQEYDNIAKLGQIIREGPIKGSLLK 3223
Mouse 3224 VVLEDYLRLKKLFAQR---MVQKASSCHSSISELIHTDL 3259 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cdh23 | XP_017169419.1 | Cadherin_repeat | 51..137 | CDD:206637 | 31/94 (33%) |
Cadherin_repeat | 145..240 | CDD:206637 | 31/99 (31%) | ||
Cadherin_repeat | 249..353 | CDD:206637 | 28/133 (21%) | ||
Cadherin_repeat | 361..463 | CDD:206637 | 27/109 (25%) | ||
Cadherin_repeat | 472..564 | CDD:206637 | 24/94 (26%) | ||
Cadherin_repeat | 573..674 | CDD:206637 | 38/103 (37%) | ||
Cadherin_repeat | 683..781 | CDD:206637 | 31/120 (26%) | ||
Cadherin_repeat | 789..893 | CDD:206637 | 32/105 (30%) | ||
Cadherin_repeat | 901..997 | CDD:206637 | 33/95 (35%) | ||
Cadherin_repeat | 1006..1105 | CDD:206637 | 28/103 (27%) | ||
Cadherin_repeat | 1113..1210 | CDD:206637 | 33/213 (15%) | ||
Cadherin_repeat | 1225..1315 | CDD:206637 | 28/89 (31%) | ||
Cadherin_repeat | 1324..1421 | CDD:206637 | 31/99 (31%) | ||
Cadherin_repeat | 1433..1530 | CDD:206637 | 39/132 (30%) | ||
Cadherin_repeat | 1540..1637 | CDD:206637 | 33/103 (32%) | ||
Cadherin_repeat | 1645..1747 | CDD:206637 | 38/101 (38%) | ||
Cadherin_repeat | 1759..1854 | CDD:206637 | 37/100 (37%) | ||
Cadherin_repeat | 1862..1962 | CDD:206637 | 33/100 (33%) | ||
Cadherin_repeat | 1970..2072 | CDD:206637 | 36/214 (17%) | ||
Cadherin_repeat | 2080..2176 | CDD:206637 | 32/95 (34%) | ||
Cadherin_repeat | 2187..2296 | CDD:206637 | 27/112 (24%) | ||
Cadherin_repeat | 2308..2405 | CDD:206637 | 29/104 (28%) | ||
Cadherin_repeat | 2413..2511 | CDD:206637 | 23/102 (23%) | ||
Cadherin_repeat | 2520..2614 | CDD:206637 | 36/97 (37%) | ||
Cadherin_repeat | 2627..2725 | CDD:206637 | 26/102 (25%) | ||
Cadherin_repeat | 2742..2848 | CDD:206637 | 33/106 (31%) | ||
Cadherin_repeat | 2857..2958 | CDD:206637 | 23/112 (21%) | ||
ft | NP_477497.1 | Cadherin_repeat | 71..152 | CDD:206637 | |
Cadherin_repeat | 163..266 | CDD:206637 | |||
Cadherin_repeat | 275..378 | CDD:206637 | |||
Cadherin_repeat | 393..490 | CDD:206637 | |||
Cadherin_repeat | 498..594 | CDD:206637 | 30/94 (32%) | ||
Cadherin_repeat | 603..704 | CDD:206637 | 31/100 (31%) | ||
Cadherin_repeat | 735..814 | CDD:206637 | 25/83 (30%) | ||
Cadherin | 843..>907 | CDD:278457 | 21/81 (26%) | ||
Cadherin | 950..1026 | CDD:278457 | 19/77 (25%) | ||
Cadherin_repeat | 1053..1149 | CDD:206637 | 38/104 (37%) | ||
Cadherin_repeat | 1157..1274 | CDD:206637 | 31/121 (26%) | ||
Cadherin_repeat | 1282..1380 | CDD:206637 | 32/105 (30%) | ||
Cadherin_repeat | 1390..1485 | CDD:206637 | 34/94 (36%) | ||
Cadherin_repeat | 1497..1597 | CDD:206637 | 28/99 (28%) | ||
Cadherin_repeat | 1621..1699 | CDD:206637 | 19/78 (24%) | ||
Cadherin_repeat | 1720..1818 | CDD:206637 | 11/97 (11%) | ||
Cadherin_repeat | 1827..1918 | CDD:206637 | 30/98 (31%) | ||
Cadherin_repeat | 1926..2023 | CDD:206637 | 31/99 (31%) | ||
Cadherin_repeat | 2031..2162 | CDD:206637 | 40/135 (30%) | ||
Cadherin_repeat | 2172..2274 | CDD:206637 | 33/102 (32%) | ||
Cadherin_repeat | 2282..2380 | CDD:206637 | 38/101 (38%) | ||
Cadherin_repeat | 2388..2487 | CDD:206637 | 38/101 (38%) | ||
Cadherin_repeat | 2495..2592 | CDD:206637 | 33/100 (33%) | ||
Cadherin_repeat | 2600..2694 | CDD:206637 | 20/101 (20%) | ||
Cadherin_repeat | 2710..2806 | CDD:206637 | 16/96 (17%) | ||
Cadherin_repeat | 2814..2909 | CDD:206637 | 33/96 (34%) | ||
Cadherin_repeat | 2917..3009 | CDD:206637 | 27/113 (24%) | ||
Cadherin | 3018..3114 | CDD:278457 | 26/98 (27%) | ||
Cadherin | 3129..3220 | CDD:278457 | 22/97 (23%) | ||
Cadherin_repeat | 3233..3330 | CDD:206637 | 36/97 (37%) | ||
Cadherin_repeat | 3338..3434 | CDD:206637 | 26/102 (25%) | ||
Cadherin_repeat | 3443..3541 | CDD:206637 | 33/109 (30%) | ||
Cadherin_repeat | 3550..3647 | CDD:206637 | 21/97 (22%) | ||
Cadherin_repeat | 3657..3753 | CDD:206637 | 17/102 (17%) | ||
EGF | 4017..4047 | CDD:278437 | |||
EGF_CA | 4056..4090 | CDD:238011 | |||
EGF_CA | 4094..4128 | CDD:238011 | |||
Laminin_G_1 | 4156..4306 | CDD:278483 | |||
LamG | 4428..4543 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 64 | 1.000 | Domainoid score | I10093 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |