DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdh23 and ft

DIOPT Version :9

Sequence 1:XP_017169419.1 Gene:Cdh23 / 22295 MGIID:1890219 Length:3361 Species:Mus musculus
Sequence 2:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster


Alignment Length:3679 Identity:1015/3679 - (27%)
Similarity:1562/3679 - (42%) Gaps:702/3679 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    50 LISEDTPVGSSVTQLLARDMD---NDPLVFGV-SGEEASRFFAVEPDTGVVWLRQPLDRETKSEF 110
            ::||..|.||.|..:.|.|.|   |..:.:.: ||.|. ::|:::|.||::....|||||.:.  
  Fly   502 VLSELAPTGSFVASITATDEDTGVNAQVHYDILSGNEL-KWFSMDPLTGLIVTTGPLDREIRD-- 563

Mouse   111 TVEFSVSDHQGVITRK-----VNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDL 170
            |||.|:|...|....|     :.:.:.|.||.||.|..:..:|.:.|:.|..|.:.::.|||.|.
  Fly   564 TVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQ 628

Mouse   171 GAGGSVLYSFQPP----SPF-FAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLAN 230
            |..|||.::..|.    .|. ||:|:..|.:|..:.||.|....|:::|.|.||....|.|..|.
  Fly   629 GTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATAT 693

Mouse   231 LAIIITDMQDMDPIFINLPYSTNIYEHSPPGTTVRV------------ITAVDQDKGRPRGIGYT 283
            :.:.:.|:.|.||.|....|   ||..:.....:::            :||.|:|.|....|.|.
  Fly   694 VWLNVADVNDNDPQFYPRHY---IYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYR 755

Mouse   284 IVSGNTNSIFALDYISGALTLNGLLDRENPLYSH---GFILTVKGTELNDDRTPSDATVTTTF-- 343
            :.||. ..:|.||..|||::|.|    :.|...|   .:.|.|...:....|:..||.|....  
  Fly   756 LESGG-EGLFQLDARSGAISLRG----DAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEIVLKS 815

Mouse   344 NILVID-------------INDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEV 395
            .:.:::             :.|:..:.||...       .:||     .:||...:...||..|.
  Fly   816 KLEMLECGQAQAGGYEFQMVEDHEQQRNSQPN-------REVG-----IVQVKSTNGKANSHIEY 868

Mouse   396 YLV-GNNSHHFIISPTSVQGKADIRIRVAIPLDYETVDRYDFDLFANES-----VPDHVGYAK-- 452
            .:: |:.:.:|.|...|.      ||..|.|||.|....|...:.|:.|     ....|.|.:  
  Fly   869 DIIQGDRAQNFRIDTRSG------RITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCI 927

Mouse   453 VKITLINENDNRPIF-----SQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPD- 511
            |.|.:|:.|||.|:|     |:|  .:||.||..||..:......|.|.|....::|..:::|: 
  Fly   928 VNIAIIDLNDNAPVFALDRESEP--TISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPNQ 990

Mouse   512 RFSLDKDTGLIMLIARLDYELIQRFTLTVIARDGGGEETTGRVRINVL--DVNDNVPTFQKDAYV 574
            :|.:...||::.|...:..|......:.::|.|.|....:.::.::||  ||||:.|.|...:|.
  Fly   991 QFRIGPVTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHTSYE 1055

Mouse   575 GALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASA---FGSYFDISIYEGYGVISVSRPLDY 636
            .:|.|.....|:...|.|||.|...|..|:|.|:..:.   ||.:.|       |.:.|..|||.
  Fly  1056 TSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFPD-------GYLFVRAPLDR 1113

Mouse   637 EQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIMAGATVLFLN 701
            |:  .....|||..:|||.|...|.|||.|.|.|||||.|.|:...:..|:.||..|...|..|.
  Fly  1114 EE--RDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLT 1176

Mouse   702 ATDLDRSREYGQESIIYSLEGSSQ-FRINARSGEITTTSLLDRET-------------------- 745
            |.|.|..|   ...:.::|...:| |.|:.|:|.|.|....|||.                    
  Fly  1177 AVDRDIGR---NAELSFTLSSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGS 1238

Mouse   746 -KSEYILIVRAV-DGGVGHNQKTGIATVNVTLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTVV 808
             ...|:|:...| |.|:...|..  ..|.|.:.|:|||.|.:..|||::.:.|.....:.:|.|.
  Fly  1239 MAGNYMLLEATVSDNGIPRLQDK--VKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVF 1301

Mouse   809 AVDPDLGENGTLVYSIHPPNKF--YSLNSTTGKIRTTHVMLDRENPDPVEAELMRKIIVSVTDCG 871
            ..|.|.|.||.:.||:...|:.  ::|:|.||::.... .||||:     .|:...|:|:.....
  Fly  1302 TQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGR-RLDRES-----QEIHHLIVVAKDAAL 1360

Mouse   872 RPPLKATSSATVFVNLLDLNDNDPTFRNLPFVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRM 936
            :.||.:.:|.|:.|  ||.|||.|.|........:||.:|.|..:.:..|.|.|:|:|..|.:.:
  Fly  1361 KHPLSSNASITIVV--LDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSI 1423

Mouse   937 QVGMPRMDFVINSTSGVVTTTAELDRERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPT 1001
            ..|..|..|.|:|.:|.:.....||.|.|..|.|.:.|||.|||:.|:|....|.|:|.||..|.
  Fly  1424 SAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPI 1488

Mouse  1002 FFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGN---VDGK-FSVGYRDAVVRTV 1062
            |........:.|.:|.:..:|.:...|.|.|||.::||.|:...   ..|: |.:.....|:.|:
  Fly  1489 FPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTL 1553

Mouse  1063 VGLDRETTAAYTLVLEAIDNGPVGKRRTGT-ATVFVTVLDVNDNRPIFLQSSYEASVPE-DIPEG 1125
            ..:|||:...:.|.:.|.|.....:|:..| ..|.|.|.|:|||.|:|:..:.....|: ...:|
  Fly  1554 REIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKG 1618

Mouse  1126 HS--IVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLLMRGPRP---------------- 1172
            .|  ::|:.|.|||....|.|.|.|:.|.. ..|::...:|::...|.|                
  Fly  1619 SSTAVMQVHAKDADSSSNGLVTYEIVSGPQ-ELFKLQRNTGIITFTPGPQFKQEVRYQLTLKSTD 1682

Mouse  1173 --LDRERNSSHVLM--------------------------------------------------- 1184
              :..||.||.|.:                                                   
  Fly  1683 EAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEY 1747

Mouse  1185 -------------------------------------------VEAYNHDLG--PMRSSVRVIVY 1204
                                                       ||.|...||  |..|..:|.|.
  Fly  1748 FVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTKVRVT 1812

Mouse  1205 VEDVNDEAPVF--TQQQYNRLGLRETAGIGTSVIVVRATDKDTGDGGLVNYRILSGAEGKFEIDE 1267
            |.|.||..|.|  |...||   :.|...||.::..:||.|.||  .|.|.:.::.|.:|||.::.
  Fly  1813 VLDKNDSPPQFLDTPFVYN---VSEDLQIGHTISTLRAHDPDT--LGSVTFLLMDGHDGKFLLEP 1872

Mouse  1268 STGLIVTVDYLDYETKTSYLMNVSATDGAPPFNQGFCSVYVTLLNELDEAVQFSNASYEAVIMEN 1332
            |||.::..|.||.|||:.|.:.:..:||. .:.:.:.::.|:..|  |....|.:..|...|.||
  Fly  1873 STGKLILNDTLDRETKSKYELRIRVSDGV-QYTEAYATIQVSDTN--DNPPLFEDTVYSFDIPEN 1934

Mouse  1333 LALGTEIVRVQAYSID--NLNQITYRFDAYTSAQAKALFKIDAITGVITVKGLVDREKGDFYTLT 1395
            ...|.::.::.|...|  ...|::|   ...|..|..:|.::..||::|:...:|.|:...|.|.
  Fly  1935 AQRGYQVGQIVARDADLGQNAQLSY---GVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYILI 1996

Mouse  1396 VVADDGG-PKVDSTVKVYITVLDENDNSPRFDFTSDSAISVPEDCPVGQRVATVKARDPDAGSNG 1459
            |.|.|.| |.:.:|:.||..|||.|||:|.||..|.|: .|.|:.|:...|.||.|:|.|:|:||
  Fly  1997 VQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSS-EVFENVPIATEVVTVSAKDIDSGNNG 2060

Mouse  1460 QVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDREELDHYILKVVASD---------------- 1508
            .:.:|:.:|::...|.|    ||.|.:...:.||||....|.|.|.|.|                
  Fly  2061 LIEYSITAGDVDSEFGI----DSNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQL 2121

Mouse  1509 --RGTPPRKKDHILQ----------------VTIL--DVNDNPPVIESPFGYNVSVNENVGGGTS 1553
              :...|||.....|                ||||  ||||..||..|  ....::.|||...|.
  Fly  2122 KLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFIS--ANETAIMENVAINTV 2184

Mouse  1554 VVQVRATDRDIGINSVLSYYITEG-NEDM------TFRMDRISGEIATRPAPPDRERQNFYHLVV 1611
            |:.|:|.|.|.|.|..:.|.:.|. :|||      .|.::...|::....| .|||.::.|.|.:
  Fly  2185 VIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDA-LDRELRSSYLLNI 2248

Mouse  1612 TVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINTSLITVQALDLDEGPNGT 1676
            |..|.|.|..|..:.:.:.|:|||||:|||....|...:.|.. :|...::.|.|.|:|||.||.
  Fly  2249 TARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENA-SIGAMVLQVSATDVDEGANGR 2312

Mouse  1677 VTYAIVAGNIINTFRINKHTGVITAAKELDYEISHGRYTLIVTATDQCPILSHRLTSTTTVLVNV 1741
            :.|:||.|:..:.|.|::.|||:..||.|:|| ...||:|.|.|.| | .|.:....|..:.:|:
  Fly  2313 IRYSIVLGDQNHDFSISEDTGVVRVAKNLNYE-RLSRYSLTVRAED-C-ALENPAGDTAELTINI 2374

Mouse  1742 NDINDNVPTFPRDYEGPF-----DVTEGQPGPRVWTFLAHDRDSGP-NGQVEYSVVDGDPLGEFV 1800
            .|||||.|||   .:.|:     :.|....|..|.|..|:|.|:.| |.||.|.:.:||. ..|.
  Fly  2375 LDINDNRPTF---LDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDS-DLFR 2435

Mouse  1801 ISPVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNV 1865
            |:...|.:.:.|  .||||..:.|.||:.|.|.|.|||:.|.:|.:.|.||||||||......:.
  Fly  2436 INASSGDIALLK--PLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHA 2498

Mouse  1866 TISENSPVSSFVAHVLASDADSGCNALLTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEYR 1930
            |:.||.|..:.|....|:|.|.|.||.|.||: .|.....|.|::.||.::....||||....|.
  Fly  2499 TVRENLPSGTHVLTPRATDKDEGLNAKLRFNL-LGEHMHRFHIDSETGEISTATTLDREETSVYH 2562

Mouse  1931 LTVSVKDNP-ENPRIARKDFDLLLVSLADENDNHPLFTEGTYQAEVMENSPAGTPLTVLNGPIL- 1993
            ||:..:|:. ..||.:..:   |.:|::|.|||.|.|...||...|        |..:..|..: 
  Fly  2563 LTLMAQDSSITEPRASSVN---LTISVSDVNDNIPKFDSTTYNVAV--------PERISKGEFVF 2616

Mouse  1994 ---ALDADEDVYAVVTYQLLGTHSDLFVIDNSTGVVT---------------------------- 2027
               |||.|:...|||.|.:.|.....|.|:..||||:                            
  Fly  2617 GARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGE 2681

Mouse  2028 -----------------------------------VRSGIIIDR-EAFSP--------------- 2041
                                               ||.|.:|.: .|.||               
  Fly  2682 QSLSSKAELTVILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGG 2746

Mouse  2042 ---------PFLELLLLAEDIGQLNGTAHLF---------------------ITILDDNDNWPTF 2076
                     |...||.:.:| |......||:                     :.:.|.|||.|..
  Fly  2747 IMGDSLRVDPNSGLLSVGQD-GLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVM 2810

Mouse  2077 SPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNATIDR 2141
            ....|...:||...|...:..|.|:|.|||.||.::||::......|.| ..:|.|.. ...:||
  Fly  2811 EQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDFDGTFEI-TESGEIYT-RMRLDR 2873

Mouse  2142 EEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTIIANVTAI 2206
            ||...|...|.|.|:|...::|||.|.:.:.|.||:.|:|.. :.:::|.|:||.|:.:..||:.
  Fly  2874 EEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTR-LFSLNVTENAEIGSFVIRVTSS 2937

Mouse  2207 DLDL--NPKLEYHIISIVAKDDTDRLVPDQEDAFAVNINTGSVMVKSPLNRELVATYEVTLSVID 2269
            ||||  |....|....            :..:.|.:...:|::.|...|:||....|.:.:...|
  Fly  2938 DLDLGANANASYSFSE------------NPGEKFRIEPQSGNITVAGHLDREQQDEYILKVVASD 2990

Mouse  2270 NA--SDLPEHSVSVPNAKLTVNILDVNDNTPQFKPFGITYYTERVLEGATPGTTLIAVAAVDPDK 2332
            .|  ::.|          :|:.|.|.|||.|:|:.   ::|:....|.......:..:.|.|.||
  Fly  2991 GAWRAETP----------ITITIQDQNDNAPEFEH---SFYSFSFPELQQSIALVGQIIATDRDK 3042

Mouse  2333 -GLNGLITYTLLDLTPPGYVQLEDSSAGKVIANRTVDYEEVHWLN-------FTVRASDNGSPPR 2389
             |.|.:|:|:|...:|...:   |.:.|:|.:.:.|.::...::.       .||.|:|||.||.
  Fly  3043 QGPNSVISYSLQQPSPMFSI---DPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPL 3104

Mouse  2390 AAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLV--DGE 2452
            .:|..|.:.|||.::|.|.|:|..|...:.:|...|..|:||.|.|........::|||:  :..
  Fly  3105 YSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLS 3169

Mouse  2453 GKFAINPNTGDISVLSSLDREKKDHYILTALAKDN---PGDVASNRRENSVQVVIRVLDVNDCRP 2514
            ..|::..:.|.|:::..:.......|.|...|.|.   |       :.:..:|||.|...|...|
  Fly  3170 SIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPP-------QSDETRVVIVVTGENMDTP 3227

Mouse  2515 QFSKPQFSTSVYENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEA--FSVDMDSGLVTTQRP 2577
            :||...:...|.||||.|::::|:.|||.|.|.|..|.||:.| |.|.  ||||..:|.:..|:.
  Fly  3228 RFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISG-GNERQDFSVDERTGGIVIQQQ 3291

Mouse  2578 L--QSYERFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILH--IKEEIPLRSN 2638
            |  ...:.::|.:...|.|..||....||.:.:.|||||.|||    |....|  |.|..|:.:.
  Fly  3292 LDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVF----NHKEYHCYIPENKPVGTF 3352

Mouse  2639 VYEVYATDNDEGLNGAVRYSFLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASDL 2703
            |::.:|.|.|...|..:.|:||.:..:|  .:|.::..:|.|.:|...|.|::.:|:|.:.|.: 
  Fly  3353 VFQAHAADKDSPKNAIIHYAFLPSGPDR--HFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKN- 3414

Mouse  2704 GQPVPYETMQP---LQVALEDIDDNEPLFVRPPKGSPQYQLLTVPEHSPRGTLVGNVTGAVDADE 2765
                |..:|:.   |.|.:..:::..|.|::|      .....|.|.|..||.||.|. |.|.|.
  Fly  3415 ----PDSSMESYANLYVHVLGVNEFYPQFLQP------VFHFDVSETSAVGTRVGAVQ-ATDKDS 3468

Mouse  2766 GPNAIVYYFIAAGDEDKNFHLQPD-GRLLVLRDLDRETEATFSFIVKASSNRSWTPPRGPSPALD 2829
            |.:..|||.:.....||.|.:..: |.:.|.|.|||||:......|.|   :::...||      
  Fly  3469 GEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLTVMA---KNYGSIRG------ 3524

Mouse  2830 LLTDLTLQEVRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALDADI-GNNSLVFYGIL 2893
              .|....:|.:.::|.|| ||.|.|..||:.::..|.||:::..|.|:|.|: ..|:...|.|:
  Fly  3525 --NDTDEAQVIISIQDGND-PPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSII 3586

Mouse  2894 AIHYFRALANDSEDVGQVFTMGSVDG--------ILRTFDLFMAYSPGYFVVDIVARDLAGHNDT 2950
            ..:..::...|.: .|::.|...:|.        ::...|..:....|...|.|...|:..:..|
  Fly  3587 NGNLKQSFKIDVQ-TGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPT 3650

Mouse  2951 AI---IGIYILRDD---QRVKIVINEIPDRVRG---FEEEFI----------------------- 2983
            ..   :..||..::   ..:..:|...||..|.   |..:.|                       
  Fly  3651 FTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVDRNSGVVRSTTSF 3715

Mouse  2984 -RLLSNITGAIVNTDDVQFHVDMKGRVNFAQTELLIHVV-----NRDTNRILDVDRVIQMIDENK 3042
             |.::.|..||:..:|       .|:.......||...|     |..|.|.|.:  .:.:.:   
  Fly  3716 DREMTPILEAIIEVED-------SGKPKQKSQHLLTITVLDQNDNPSTTRSLHI--AVSLFN--- 3768

Mouse  3043 EQLRNLFRNYNVLDVQP---------AISVQLPDDMSALQMAIIVLAILLFLAAMLFVLMNWYYR 3098
               .:|..|..:.||:|         ...:|.....|.||:||.....|:              .
  Fly  3769 ---GDLPSNVKLADVRPNDIDIVGDYRCRLQKNPAQSQLQLAIPRACDLI--------------T 3816

Mouse  3099 TIHKRKLKAIVA--GSAGNRGFIDIMDMPNTNKYSFDG---ANPVWLDPFCRNLELAAQAEHEDD 3158
            |.|...:.::.:  |:.|..|  |:....:....||:.   ||.|.:  ..||:    .|.|  .
  Fly  3817 TSHTTPIASVFSYTGNDGKHG--DVSSKVSVAFQSFNNETLANSVSI--MVRNM----TAYH--F 3871

Mouse  3159 LPENLSEIADLWNSPTRTHGTFGREPAAVKPDDDRYLRAAIQEYDNIAKLGQIIREGPIKGSLLK 3223
            |..:...|.::                         :::.:...|.:. |..::..|....:.|:
  Fly  3872 LANHYRPILEM-------------------------IKSRMSNEDEVI-LYSLLEGGSGNSTNLQ 3910

Mouse  3224 VVLEDYLRLKKLFAQR---MVQKASSCHSSISELIHTDL 3259
            :::.  :||.|...|:   ::::.....|:.|||:..::
  Fly  3911 LLMA--VRLAKTSYQQPKYLIERLREKRSAFSELLQKEV 3947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdh23XP_017169419.1 Cadherin_repeat 51..137 CDD:206637 31/94 (33%)
Cadherin_repeat 145..240 CDD:206637 31/99 (31%)
Cadherin_repeat 249..353 CDD:206637 28/133 (21%)
Cadherin_repeat 361..463 CDD:206637 27/109 (25%)
Cadherin_repeat 472..564 CDD:206637 24/94 (26%)
Cadherin_repeat 573..674 CDD:206637 38/103 (37%)
Cadherin_repeat 683..781 CDD:206637 31/120 (26%)
Cadherin_repeat 789..893 CDD:206637 32/105 (30%)
Cadherin_repeat 901..997 CDD:206637 33/95 (35%)
Cadherin_repeat 1006..1105 CDD:206637 28/103 (27%)
Cadherin_repeat 1113..1210 CDD:206637 33/213 (15%)
Cadherin_repeat 1225..1315 CDD:206637 28/89 (31%)
Cadherin_repeat 1324..1421 CDD:206637 31/99 (31%)
Cadherin_repeat 1433..1530 CDD:206637 39/132 (30%)
Cadherin_repeat 1540..1637 CDD:206637 33/103 (32%)
Cadherin_repeat 1645..1747 CDD:206637 38/101 (38%)
Cadherin_repeat 1759..1854 CDD:206637 37/100 (37%)
Cadherin_repeat 1862..1962 CDD:206637 33/100 (33%)
Cadherin_repeat 1970..2072 CDD:206637 36/214 (17%)
Cadherin_repeat 2080..2176 CDD:206637 32/95 (34%)
Cadherin_repeat 2187..2296 CDD:206637 27/112 (24%)
Cadherin_repeat 2308..2405 CDD:206637 29/104 (28%)
Cadherin_repeat 2413..2511 CDD:206637 23/102 (23%)
Cadherin_repeat 2520..2614 CDD:206637 36/97 (37%)
Cadherin_repeat 2627..2725 CDD:206637 26/102 (25%)
Cadherin_repeat 2742..2848 CDD:206637 33/106 (31%)
Cadherin_repeat 2857..2958 CDD:206637 23/112 (21%)
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637
Cadherin_repeat 163..266 CDD:206637
Cadherin_repeat 275..378 CDD:206637
Cadherin_repeat 393..490 CDD:206637
Cadherin_repeat 498..594 CDD:206637 30/94 (32%)
Cadherin_repeat 603..704 CDD:206637 31/100 (31%)
Cadherin_repeat 735..814 CDD:206637 25/83 (30%)
Cadherin 843..>907 CDD:278457 21/81 (26%)
Cadherin 950..1026 CDD:278457 19/77 (25%)
Cadherin_repeat 1053..1149 CDD:206637 38/104 (37%)
Cadherin_repeat 1157..1274 CDD:206637 31/121 (26%)
Cadherin_repeat 1282..1380 CDD:206637 32/105 (30%)
Cadherin_repeat 1390..1485 CDD:206637 34/94 (36%)
Cadherin_repeat 1497..1597 CDD:206637 28/99 (28%)
Cadherin_repeat 1621..1699 CDD:206637 19/78 (24%)
Cadherin_repeat 1720..1818 CDD:206637 11/97 (11%)
Cadherin_repeat 1827..1918 CDD:206637 30/98 (31%)
Cadherin_repeat 1926..2023 CDD:206637 31/99 (31%)
Cadherin_repeat 2031..2162 CDD:206637 40/135 (30%)
Cadherin_repeat 2172..2274 CDD:206637 33/102 (32%)
Cadherin_repeat 2282..2380 CDD:206637 38/101 (38%)
Cadherin_repeat 2388..2487 CDD:206637 38/101 (38%)
Cadherin_repeat 2495..2592 CDD:206637 33/100 (33%)
Cadherin_repeat 2600..2694 CDD:206637 20/101 (20%)
Cadherin_repeat 2710..2806 CDD:206637 16/96 (17%)
Cadherin_repeat 2814..2909 CDD:206637 33/96 (34%)
Cadherin_repeat 2917..3009 CDD:206637 27/113 (24%)
Cadherin 3018..3114 CDD:278457 26/98 (27%)
Cadherin 3129..3220 CDD:278457 22/97 (23%)
Cadherin_repeat 3233..3330 CDD:206637 36/97 (37%)
Cadherin_repeat 3338..3434 CDD:206637 26/102 (25%)
Cadherin_repeat 3443..3541 CDD:206637 33/109 (30%)
Cadherin_repeat 3550..3647 CDD:206637 21/97 (22%)
Cadherin_repeat 3657..3753 CDD:206637 17/102 (17%)
EGF 4017..4047 CDD:278437
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:278483
LamG 4428..4543 CDD:238058
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I10093
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100175
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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