Sequence 1: | XP_006512769.1 | Gene: | Utrn / 22288 | MGIID: | 104631 | Length: | 3435 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
Alignment Length: | 1777 | Identity: | 354/1777 - (19%) |
---|---|---|---|
Similarity: | 652/1777 - (36%) | Gaps: | 549/1777 - (30%) |
- Green bases have known domain annotations that are detailed below.
Mouse 551 TEKEEALNKVQTSNFKDQKELSVSVRRLAILKEDMEMKRQTLDQLSEIGQDVGQLLSNPKASKKM 615
Mouse 616 NSDSEELTQRWDSL-VQR---LEDSSNQVTQAVAKLG---------MSQIPQKDLLETVHVREQG 667
Mouse 668 MVKKPKQELPPPPPPKKRQIHVDVEAKKKFDAISTELLNWILKSKTAIQNTEMKE-YKKSQETSG 731
Mouse 732 M------KKKL-----------KGLEKEQK--ENLPRL--------DELNQTGQTLREQM----- 764
Mouse 765 ---------------------GKEGLSTEEVNDVLERVSLEWKMISQQL-EDLGRKIQLQEDINA 807
Mouse 808 YFKQLDAIEETIKEKEEWLRGTPISESPRQPLPGLKDSCQRELTDLLGLHPRIETLCASCSALKS 872
Mouse 873 QPCVPGFVQQGFDDLRHHYQAVRKALEEYQQQLENELKSQPGPAYLDTLNTLKKMLSESEKAAQA 937
Mouse 938 SLNALNDPIAVEQALQEKKALDETLENQKHTLHKLSEETKTLEKNMLPDVGKMYKQEFDDVQGRW 1002
Mouse 1003 NKVKTKVSRDLHLLEEITPRLRDFEADSEVIEKWVSGIKDFLMKEQAAQGDAAAL---------Q 1058
Mouse 1059 SQLDQCATFANEIETIE---SSLKNMREVETSLQRCPVTGVKTWVQARLVDYQSQLEKFS--KEI 1118
Mouse 1119 AIQKSRLSDSQE------------KALNLKKD--LAEMQEWMAQAEEDYLERDFEYKS--PEELE 1167
Mouse 1168 SAVEEMKRAKEEVL-QKEVRVKILKDSIKLVAAKVPSGGQELTSEFNEVLESYQLLCNRIRGKCH 1231
Mouse 1232 TLEEVWSCWVELLHYLDLETTWLNTLEERVRSTEALPERAEAVHEALESLESVLRHPADNRTQIR 1296
Mouse 1297 ELGQTLIDGGILDDIISEKLEAFNSRYEELSHLAESKQISLEKQLQVLRETDHMLQ---VLKESL 1358
Mouse 1359 GELDKQLTTYLTDRIDAFQLPQEA-----QKIQAEISAHELTLEELRKNVRSQPPT-SPEGRATR 1417
Mouse 1418 GGSQMDMLQRKLREVSTKF-----QLFQKPANFEQRMLDCKRVLEGVKAELHVLDVRDVDPDVIQ 1477
Mouse 1478 AHLDKCMKLYKTLSEVKLEVETVIKTGRHIVQKQQTDNPKSMDEQLTSLKVLYNDLGAQVTEGKQ 1542
Mouse 1543 DLERASQLSRKMKKEAAVLSEWLSATEAEL--VQKSTSEGV--IGDLDTEISWAKSILKDLEKRK 1603
Mouse 1604 VDLNGITESSAALQHLVLGSESVLEENLCVLNAGWSRVRTWTEDWCNTLLNHQNQLELFDGHVAH 1668
Mouse 1669 ISTWLYQAEALLDE---IEKKPASKQEEIVKRLLSELDDASLQVENVREQAIILVNARGSASR-- 1728
Mouse 1729 ---ELVEPKLAELSRNFEKVSQHIKSARMLIGQDPSSYQGLDPAGTVQAAESFSDLENLEQDIEN 1790
Mouse 1791 MLKVVEKHLDPNNDEKMDEEQAQIEEVLQRGEHLLHEPMEDSKKEKIRLQLLLLHTRYNKIKTIP 1855
Mouse 1856 IQQRKTIPVSSGITSSALPA-----DYLVEINKILLTLDDIELSLNMPELNTTVYKDFSFQEDSL 1915
Mouse 1916 KSIKGQLDRLGEQIAVVHEKQPDVIVEASG--PEAI-QIRDMLAQLNAKWDRVNRVYSDRRGS-- 1975
Mouse 1976 -----FARAVEEWRQFHHDLDDLTQWLSEAEDLLVDTCAPDGSLDLEKARAQ-QLELEEG----- 2029
Mouse 2030 -LSSHQPSLIKVNRKGED-------LVQRLRPSEASFLKEKLAGFNQRWSTLVAEVEALQPRLKG 2086
Mouse 2087 ----ESQQVLGYKRRLDEVTCWLTKVESAVQKRSTPDPEESPQELTDLAQETEVQAENIKWLNRA 2147
Mouse 2148 ELEMLSDKNLSLREREKLSESL 2169 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Utrn | XP_006512769.1 | SAC6 | 37..>274 | CDD:227401 | |
SPEC | 315..531 | CDD:238103 | |||
SPEC | 430..635 | CDD:238103 | 16/87 (18%) | ||
SPEC | <744..909 | CDD:351773 | 30/201 (15%) | ||
PRK03918 | 883..1502 | CDD:235175 | 140/663 (21%) | ||
CCDC158 | 1312..>1838 | CDD:318193 | 118/551 (21%) | ||
SPEC | 1982..2184 | CDD:238103 | 46/206 (22%) | ||
SPEC | 2233..2445 | CDD:238103 | |||
SPEC | 2453..2693 | CDD:238103 | |||
SPEC | 2695..>2811 | CDD:238103 | |||
WW | 2820..2848 | CDD:238122 | |||
EFh_UTRO | 2885..3046 | CDD:320005 | |||
EF-hand-like motif | 2885..2923 | CDD:320005 | |||
EF-hand-like motif | 2931..2965 | CDD:320005 | |||
EF-hand-like motif | 2971..3007 | CDD:320005 | |||
EF-hand-like motif | 3020..3046 | CDD:320005 | |||
ZZ_dystrophin | 3071..3119 | CDD:239074 | |||
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | |
CAP_GLY | 125..189 | CDD:396049 | |||
CAP_GLY | 239..306 | CDD:396049 | |||
SMC_prok_B | <546..912 | CDD:274008 | 95/483 (20%) | ||
Smc | 734..1591 | CDD:224117 | 237/1131 (21%) | ||
SHE3 | 1502..1702 | CDD:293683 | 51/232 (22%) | ||
CLIP1_ZNF | 1773..1789 | CDD:406934 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |