DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp9x and puf

DIOPT Version :10

Sequence 1:XP_006527649.1 Gene:Usp9x / 22284 MGIID:894681 Length:2575 Species:Mus musculus
Sequence 2:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster


Alignment Length:3149 Identity:573/3149 - (18%)
Similarity:1011/3149 - (32%) Gaps:1183/3149 - (37%)


- Green bases have known domain annotations that are detailed below.


Mouse    23 QSQPPLQQNQTSSPDSSNENS-PATPP-----------DEQGQGDAP---PQIEDEEPAFPHT-- 70
            |.|...|:::.|:...:.|:| ||..|           :.||.||.|   |.:....|..|.|  
  Fly   102 QQQREQQRDEASAQAEAKESSAPAEEPKKEEPSGSAGEEAQGSGDGPAKKPPVGPCTPPPPQTAN 166

Mouse    71 DLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLS-------KKGLDVKSEACQRFFRDGLTISF 128
            ...|.........|::|.:.|  |.||:.....|:       |.|:..:.:..|           
  Fly   167 PQHKSHLQYTEEPWILPEVEK--LLVLVSKVFLLNFPLYIAHKHGMHSRLDDLQ----------- 218

Mouse   129 TKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPC 193
                .:||                |.|..:|  .|..:..|:..|                    
  Fly   219 ----AEEA----------------HHLALIC--DLHDNDLPIYLL-------------------- 241

Mouse   194 ESVSSSVQLPEDELFARSPDPRSPKGWLVDLLNKFGTLN------GFQILHDRFINGSALNVQII 252
            .:||         ||..|              ..||.::      ...:.....:..:..||:: 
  Fly   242 RNVS---------LFCNS--------------GGFGAMSLCFEHPDLPVSTAHSMTAAVSNVKL- 282

Mouse   253 AALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN-------EAKNDALSMI 310
                        :|..|...:.|:|:...:.|::..|:|:.|:..|..       .:..|.|.:.
  Fly   283 ------------WLNYHCNTQLFVPLRSRILQYMCKLSDQSLRSAATRAMADFVWSSMRDPLDVA 335

Mouse   311 IK-SLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV--NKVISSVSYYTHRH 372
            :. ..:.||........|.         :.:||..::..|..:|..||:  .:.::.|.      
  Fly   336 VNFDTEGLALAFKYFTSTT---------LTMRLAGMAQINAHINLFNEICTTETVNEVE------ 385

Mouse   373 GSSEDEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 437
                    |..:|:|.|:.:|:|:..:...:|| .:.|::...:|.|:..|..::.:|:..||.|
  Fly   386 --------LFGQRIANWLTENHIVQHLFGPNLH-VEIVKQAHVLLNFLAVENQISEEDIKLIWQA 441

Mouse   438 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCF--------------------KASWTNASKK 482
            ...||  ..|.:.|:|..|..:.:|....||:...                    |..||..:.:
  Fly   442 TQLKH--CSKTIFDILPSLVKNLTPRPAMHLYSLLCRMDPKEHTEQSIYIASALTKQLWTRDTSR 504

Mouse   483 QREKLLE-----------------LIRRLAEDDK-----------------------DGV----- 502
            .:..|::                 :.....|||.                       |||     
  Fly   505 SQMNLMQDHLLGSNVTASSSDSGSIEGSNTEDDHVGADDSSIASGGGGGGVGNKSPIDGVTPCKQ 569

Mouse   503 ----------------------MA------HKVLNLLWNLAHSDD-------------------- 519
                                  ||      .:::|::.|.:..::                    
  Fly   570 ARHRRHICDPTTEKGKQISPEDMAKVDLVNKRIVNIIDNTSSEEELQSRAALELQLHRSRKKTSN 634

Mouse   520 ------------VPVDIMDL------------------------ALSAHIKILDYSCSQ---DRD 545
                        :|.:::::                        .|:...:..|.:.||   |..
  Fly   635 KRRRQKTNKQIILPHELVEIWDGVEDVPSSDEADGEADGDGEGELLADSDECSDGATSQLVPDAV 699

Mouse   546 TQKIQWIDRFIEELRTN------------------------------DKWVIPALKQIREI---- 576
            .:.:|....||..:.||                              |:.|.|..:::.::    
  Fly   700 LKHLQGEGPFIRAIETNINELLSGAENDGSYSSPMSNKSEKNLADFDDEDVSPCEEELAQLVSSR 764

Mouse   577 --CS------------------------------------------LFGEAPQNL---------- 587
              ||                                          ..|.|.|.|          
  Fly   765 ANCSDVPPAFAAAAAAMMVAQSAMALQKSGESNVAAAAAAVAAAAAATGTAQQTLVAMNRQASVA 829

Mouse   588 --------------------------------SSSRFSQSQRSPHV------------------- 601
                                            .:|:.|.:..|..|                   
  Fly   830 AAAAVVAAAKAKSDSDVDLMDVVSGGKQHHSPKASQGSSTSGSTPVQPSFKLNDVCQPGNTLLWD 894

Mouse   602 FYRHDLINQ------LQHNHALVTL--------------------VAEN-------------LAT 627
            ..:.|.|.|      |:...||.||                    ||.|             .|:
  Fly   895 LLQDDKIGQLGESLALEAEKALATLLCFSMDRQLRTKFIEGCLYNVANNRSVIVSLRLLPKLFAS 959

Mouse   628 YME-------SMRMYGRDN------------------------EDYDPQTVRLGSR-YSHVQEVQ 660
            :.:       ||.|:...|                        ::.:.|..:||.: |||..:|.
  Fly   960 FQQFRPSDTHSMTMWAERNHRMMQCFFNNIRHYARRHAEVLITQNGEQQQQQLGGQLYSHKTQVS 1024

Mouse   661 ERLNFLRFLL------KDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLM-----GDEP 714
            .||.||..:.      |..:|.|  .|...:|:.||.      |.|....::|.|.     ||:.
  Fly  1025 VRLQFLSSIFSTVGSPKSFRLTL--EQLDALWEWLAH------DPECADCYFSWLQAQAKGGDQH 1081

Mouse   715 DLDPDINKDFFESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDL----ELIG 775
            .|..:..:..:...:.:|.|...:...:..|::.     |...::.........|.:    ..:|
  Fly  1082 ALGIEALQHLYLKKLPELRPEEFSMVALGLFQQL-----CSFARIAMAEYDNHSDQISASASAVG 1141

Mouse   776 LDYLWRVVI--QSNDDIACRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVL 838
            :.:||::.:  ||| |::..||..:...|  :|.:|:     :.::|:..|.:.|..:...|..:
  Fly  1142 MYHLWKIALRAQSN-DVSLAAIQYINMYY--MGQQLR-----LEKEFVSQCMENLVQAATALESI 1198

Mouse   839 DGDKDSINCARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSFIVRFPNQGRQ 903
            | |::::       :|:.|.|.:|..:::                 .||.::...:.|:..:|:.
  Fly  1199 D-DENAL-------MRVQRGLLLLNTHLD-----------------TFRRRYAFHLRRWAIEGKG 1238

Mouse   904 VDDLEVWSHT---NDTIGSVRRCILNR-------------------IKANVA------HTKIELF 940
            :.     ||:   |:..|...|.:|.:                   :||.|:      .|.:...
  Fly  1239 IG-----SHSNLKNEGAGPPLRIVLQQAGLSEKSLLQMHACDLIADLKAEVSKWWESLQTGLAAP 1298

Mouse   941 VGGELIDPGD--------------DRKLIGQLNLKDKSLITAKLTQISSNMPSSPDSSSDSSTGS 991
            |.|.|:..|.              |.:.:|....||..::...|                ...|:
  Fly  1299 VLGLLLSDGPLRIITQGQELTSDYDERSLGDAGFKDNQIVYVSL----------------GGRGA 1347

Mouse   992 PGNHGN--HYSDGPNPEVESCLPGVIMSLHPRYISFLW----QVADL---GSSLNMPPLRDGARV 1047
            .....|  |.|..|.|..| |||.|:: |.|:|...|:    .:.|:   .|::| |.....|::
  Fly  1348 RRKESNLEHPSMLPPPPKE-CLPTVLL-LQPKYFEKLFCLMQTLGDMQPQASTVN-PQHHTKAQL 1409

Mouse  1048 L-------MKLMPPDSTTIEKLRAICLDHAKLGESSLSPSLDSLFFGPSASQVLYLTEVVYALLM 1105
            |       :.::|.:...::..:::..|.::|.:.......:.|     |::...:.:....||.
  Fly  1410 LSRRVWDILAMLPTNPHILDAFKSLVTDLSELEQLDAGGEEEQL-----ATKRKQIKQKFRDLLD 1469

Mouse  1106 PAGAPLTDDSSDFQF--HFLKSGGLPLVLSMLTRNNFLPNADM----------ETRRGAYLNA-- 1156
            |      ::...|.:  |.::|    |.|:...|.....|..|          ::..|...|:  
  Fly  1470 P------NNLQKFMYSLHIVES----LALTSSRRGESNGNVAMGNTPEQVRVKKSSMGRRRNSNE 1524

Mouse  1157 --------LKIAKLLLTAI----------GYGHVRAVAEACQPGVEGVNPMTSVNQ----VTHDQ 1199
                    :|::|..|..:          |...|...|.:...|.:...|.....:    .|.:|
  Fly  1525 QPPPPPPEVKMSKEQLCELEAPLTPTPSTGLQDVETEASSSSGGDKENQPKQHSKRQKKGETFEQ 1589

Mouse  1200 AVVLQSALQSIPNPS----------------SECMLRNVSVRLAQQISDEA----SRYMPDICV- 1243
            .........:.|:|:                ||..::...:|...:|..|.    |.:..::.: 
  Fly  1590 EKERPVGCSTPPSPTPPPPALSVVERGDNKWSEAFVKCGGLRHLYEIFSEGQLQQSAHPKELALN 1654

Mouse  1244 ------IRAIQKIIWTSGCGGLQ------LVFSPNE------EVTKIYEKTNAGNEPDLEDEQVC 1290
                  :.::.:|:|..|...||      |:..|:.      ||.:...:.::....::..:.  
  Fly  1655 EWRHDCLASLLRILWLLGFEELQSADAHVLMSRPHPFMLQLMEVPQCLTRLSSILNDEVHQQH-- 1717

Mouse  1291 CEALEVMTLCF---------------ALIPTALDAL---------SKEKAWQTFIIDLLLHCH-- 1329
             :|.....|.|               .||..|::.|         ::...|.....|   ||.  
  Fly  1718 -QASSANPLVFPYQFQHLRTGFWGRAQLIQFAMNILVSFVHASAEARRLLWAPTGTD---HCRWL 1778

Mouse  1330 SKTVRQ-----VAQEQFFLMCT---RCCMG--HRPLLFFITLLFTVLGSTARERAKHSG------ 1378
            .|.:.:     |.:|    :|.   |.|:|  |...|....||..::..........||      
  Fly  1779 QKFILEDPEPAVRRE----ICAGLYRICLGNAHSYRLLLAPLLHKLIALLPLAEQMSSGNQHTQF 1839

Mouse  1379 ---------------DYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDDVKRTGET--- 1425
                           |||.||..|        ::..:.|::....|| ::.:.:.:.::..|   
  Fly  1840 LLSEEGKDPYGPACRDYFWLLARL--------VDTLSPEMVAEEHID-IEMLCESISQSILTREY 1895

Mouse  1426 -----GVEETILEGHLGVTKELLAFQTPEKKFHIGCEKGGANLIKELIDDFIFPASNVYLQYMRN 1485
                 |.::..|.|.|.:...|:.:.|..|     ......:.|::|| .|:|...:        
  Fly  1896 YELRHGYQDDGLVGLLNLMSNLIKYDTTFK-----YTPKALSFIEQLI-GFLFDMPS-------- 1946

Mouse  1486 GELPAEQAIPVCGSPATINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYL 1550
               ||::..|.|.|.::..:.::|||.|..||..|...:...|...:..|.     :....|:|.
  Fly  1947 ---PADRQKPKCKSASSRASAYDLLVELCRGCATNYAYLHGRLLAQHKSGP-----KQPYPWDYW 2003

Mouse  1551 PPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESN 1615
            |....|...|:|||.|.||||||.|.:|.|||:|..|..:|.:                      
  Fly  2004 PRDEGRAECGYVGLTNLGATCYMASCVQHLYMMPQARAAVLRV---------------------- 2046

Mouse  1616 VDPRDDVFGYPQQFEDKPPLSKTEDRKEYNIG-VLRHLQVIFGHLAASRLQYYVPRGFWKQFRLW 1679
                             ||   ...||.   | .|..||.:|.:|..|..:.|.||.|.:.:::.
  Fly  2047 -----------------PP---NAARKH---GPTLLELQRMFAYLLESERKSYNPRSFCRVYQMD 2088

Mouse  1680 GEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTT 1744
            .:|:|..||.|..|||..||..|::....|.|  ::.::..||.::..:...|.|.....|.|.|
  Fly  2089 HQPLNTGEQKDMAEFFIDLVSKLEDMTPDLKH--LVKRLFCGSLSNNVVSLDCGHVSRTAEDFYT 2151

Mouse  1745 LNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDW 1809
            :...:.:.:||.:||::....|.|||.|.|.|.:|.|||...||...||||.:|.....|:.::.
  Fly  2152 VRCQVADMRNLQESLDEVTVKDTLEGDNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNM 2216

Mouse  1810 ERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQ---------SESEKAGS 1865
            ......|.|.:|.||..|:|..|    |.|........|.:..:|.|:         :::|||.:
  Fly  2217 VTMLKEKVNTHFSFPLRLNMCHY----VEKTLMPQQYKEERERRQKEKEGADGSGDGNDNEKAEA 2277

Mouse  1866 T---------KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKN-RWYKFDDGDVTECKMDDDEE 1920
            |         :|.||||.||:|.|.||||||:|.:|.......: ||:.|:|.:|   |..|..:
  Fly  2278 TLDDDIEECYEYELVGVTVHTGTADGGHYYSFIKERTKTSYHTHERWFLFNDAEV---KPFDPSQ 2339

Mouse  1921 MKNQCFGGEYMGEVFDHMMKR---MSYRRQKRWWNAYILFYERMDTIGHDDEVIRYISEIAITTR 1982
            :..:|||||...:.:|.:.::   .|:.:..   :||:|||||.    ..:.:.|..||:.:|..
  Fly  2340 IAAECFGGEMTSKTYDSVTEKYLDFSFEKTN---SAYMLFYERR----LPEHLQRRHSELLVTPT 2397

Mouse  1983 PHQIV-------MPSAIERS--------------------------------------------- 1995
            |...|       .|:.:|.|                                             
  Fly  2398 PSPTVEEKSEAEEPTKMETSSSEIKADVDVEVEVEEKDKEKPAQTDTESKETPAKEEIADDKSKQ 2462

Mouse  1996 -------VRKQ------------------------------------------------------ 1999
                   :.||                                                      
  Fly  2463 DEPEEKKIEKQSREGEEKSETDEKPTEMTTVSTEEEKQPTANCDNHQQNNNSNSKASNDQQPSTS 2527

Mouse  2000 ------------------------NVQFMHNRMQYSLEYFQFMKKLLTCNGVYLNPPPGQDHLSP 2040
                                    |.||:.:|..:...||.||.::  |..:            |
  Fly  2528 KAAQKLQLFRPLLNKELEDWIWQDNRQFLQDRNIFEHTYFNFMWQI--CGHI------------P 2578

Mouse  2041 EA----EEITMISIQLAARFLFTTGFHTKKIVRGSASDWYDALCILLRHSKNVRFWFAHNVLFNV 2101
            ::    .::|.::.:|:..|...|..|.|:  :.:...|.:.|......|:....||       :
  Fly  2579 QSLISETDVTCMAAKLSVSFFIETFIHAKE--KPTMVPWVELLTKQFNASQEACEWF-------L 2634

Mouse  2102 SNRFSE------YLLECPSAEVRGAFAKLIVFI--------AHFSLQDGPCPSPFASPGPSSQAY 2152
            |:...|      .|::||:..||..|.:|::.:        ||..|:       ..:.....:..
  Fly  2635 SHMSQEPYWPVQVLIQCPNQMVRQMFQRLVIHVIQQLRASHAHLYLE-------VETDEDDKELI 2692

Mouse  2153 DNLSLSDHLLRAVLNLLRREVSEHG-----RHLQQYFNLFVMYANLGVAEKTQLLKLSVPATFML 2212
            ...|.....:.::::||     |||     |||.:||.|...::.:|..|...||::.|..:.:.
  Fly  2693 GQASCVTRFIGSLISLL-----EHGARANLRHLSEYFGLLCEFSRMGDEEAMYLLRIGVLKSLVD 2752

Mouse  2213 VSLDEGPGPPI------------------KYQYAELGKLYSVVSQLI-RCCNVSSRMQSSINGNP 2258
            ..|.......|                  |.:.|.|.|:.::.:.|: |......|::.|.....
  Fly  2753 FYLGHKQTDSIDISSDNEDNSSEEALSVEKMRPASLDKMIALCASLVERSRGADFRLRLSPKDFS 2817

Mouse  2259 SLPNPFGDPNLSQPIMPIQQNVVDILFVRTSYVKKIIEDCSNSDETVKLLRFCCWENPQFSSTVL 2323
            ::....|.|.|.|.                      |:|..|..:|..|:...|..:.:.::.::
  Fly  2818 AIAGGKGFPFLYQQ----------------------IKDGINPHQTKHLIHALCRWDERLATQII 2860

Mouse  2324 SELLWQVAYSYTYELRPYLDLLLQILLIE 2352
            ..|...|. .:|....|:..||  .||.|
  Fly  2861 GMLFASVT-KHTELCAPFFKLL--TLLTE 2886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp9xXP_006527649.1 Ubl1_cv_Nsp3_N-like <905..969 CDD:475130 18/105 (17%)
peptidase_C19C 1560..1963 CDD:239124 132/425 (31%)
DUF3517 2102..2481 CDD:463438 58/289 (20%)
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 132/429 (31%)
DUF3517 2648..>2884 CDD:463438 53/272 (19%)
MDN1 <3661..>3887 CDD:444083
Blue background indicates that the domain is not in the aligned region.

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