DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp9x and Usp47

DIOPT Version :10

Sequence 1:XP_006527649.1 Gene:Usp9x / 22284 MGIID:894681 Length:2575 Species:Mus musculus
Sequence 2:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster


Alignment Length:1641 Identity:334/1641 - (20%)
Similarity:551/1641 - (33%) Gaps:580/1641 - (35%)


- Green bases have known domain annotations that are detailed below.


Mouse  1051 LMPPDSTTIEKLRAICLDHAKLGESSLSPSLDSLFFGPSASQVLYLTEVV--------YALLMPA 1107
            |.|.|:..:..|.|:                        .||::|  ||.        :.:|:|:
  Fly    55 LQPHDNKDLVNLNAL------------------------ESQLMY--EVAGFEPQLKNHLILLPS 93

Mouse  1108 GAPLTDDSSDFQFHFLKSGGLPLVLSMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAIGYGHV 1172
            |:...|.:..|:        ||:...::.:   :..:|.|             |....|.|....
  Fly    94 GSWDGDVTKRFE--------LPIKRVVVKK---VMKSDGE-------------KAKSPATGEKKK 134

Mouse  1173 RAVAEACQPGVEGVNPMTSVNQVTHDQAVVLQSALQSIPNPSSECMLRNVSVRLAQQISDEASRY 1237
            |.|.|..:......:...|..:.|.:.::. ::::.|..:|.....::..:.::::..|::|.|.
  Fly   135 RVVGEKTKKKPASGSSSPSKAKTTSEDSLA-KTSISSESSPEKTSKIKTTAAKISKPGSEKAPRA 198

Mouse  1238 MPDICVIRAIQKIIWTSGCGGLQLVFSPNEEVTKIYEKTNAGNEPDLEDEQVCCEALEVMTLCFA 1302
            .|:.|                       .|..|:|..|..:...|      |..:..:|.:.   
  Fly   199 SPEEC-----------------------PELSTEINSKNTSSESP------VAKKTAKVTSK--- 231

Mouse  1303 LIPTALDALSKEKAWQTFIIDLLLHCHSKTVRQVAQEQFFLMCTRCCMGHRPLLFFITLLFTVLG 1367
              || |:.||..|.             |..::::..|.                         :.
  Fly   232 --PT-LELLSPIKP-------------SSPIKELDCEP-------------------------VD 255

Mouse  1368 STARERAKHSGDYFTLLRHLLNYAYN--SNINVPNAEVLLNNEI--------DWLKRIRDDVKRT 1422
            :.::::.......:...|:|::...:  |::.:.:||.|.::::        ..|....|....|
  Fly   256 TLSKQQLSEQLQLYPQGRNLISPVDDAPSDLFISDAEQLSDDDLALGASASPTMLGPGYDYGAPT 320

Mouse  1423 GETGVEETILEGHLGVTKELLAFQTPEKKFHIGCEKGGANLIKELIDDFIFPA-SNVYLQYMRNG 1486
            |::.|     ||..|||       .|..   ||            .||..:|| ||.|.:.....
  Fly   321 GDSDV-----EGVTGVT-------DPST---IG------------TDDGTYPALSNFYRRKYGGD 358

Mouse  1487 ELPAEQAIPVCGSPATINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLP 1551
            ||.|.|.:...|:.                                ::.:|.|..||......| 
  Fly   359 ELRAWQRVNTTGAD--------------------------------FVSSATTETEAEARQASL- 390

Mouse  1552 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNV 1616
              |||   |:|||.|...|||:||::|.|:|.|..||.:                          
  Fly   391 --GPR---GYVGLVNQAMTCYLNSLLQALFMTPEFRNAL-------------------------- 424

Mouse  1617 DPRDDVFGYPQQFEDKPPLSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYY----VPRGF-WKQF 1676
                    |..:|::        |.:..||..  .||.:|.:|..|.....    :.|.| |...
  Fly   425 --------YRWEFDN--------DNEAKNIPY--QLQKLFLNLQTSPKAAVETTDLTRSFGWDST 471

Mouse  1677 RLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEES 1741
            ..|       :|||..|....:.|:|:...|......::|.:..|...|...|..|......|::
  Fly   472 EAW-------QQHDIQELCRVMFDALEHKFKNTKQANLISNLYEGKMNDYVKCLECNTEKTREDT 529

Mouse  1742 FTTLNVDIR------NHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAI 1800
            |..:.:.:|      .:.::.::|..:|:.:.|:|.|.|.||||.||.|..|.|..|..|.:|.:
  Fly   530 FLDIPLPVRPFGSSSAYGSIEEALRAFVQPETLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTL 594

Mouse  1801 QLKRFDYDWERECAIKFNDYFEFPRELDMEPY----------------------TVAGVAKLEGD 1843
            .|||||:|::....||.||...||:.|::..:                      |....:.:|.|
  Fly   595 HLKRFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDCSTADSGSAMEDD 659

Mouse  1844 NVNP-----------ESQLIQQNE-------QSESEKAGSTK--YRLVGVLVHSGQASGGHYYSY 1888
            |::.           |:.|..::|       .|:|.|.||..  |.|..:::|||.|||||||:|
  Fly   660 NLSSGVVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPYLYELFAIMIHSGSASGGHYYAY 724

Mouse  1889 IIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFG---GEYMGEVFDHMMKRMSYRRQKRW 1950
            |     .|.:.|.|:.|:|.:||....:|.:    :.||   |.|....:....           
  Fly   725 I-----KDFDNNEWFCFNDQNVTSITQEDIQ----RSFGGPNGSYYSSAYTSST----------- 769

Mouse  1951 WNAYILFYERMDTIGHDDEVIRYISEIAITTRPHQIVMPSAIERSVRKQNVQFMHNRMQYSLEYF 2015
             |||:|.|.::|  ...:|::..:::           .|..|:..:.|     :|:.        
  Fly   770 -NAYMLMYRQVD--AKRNELVAKVAD-----------FPEHIKTLLPK-----LHSE-------- 807

Mouse  2016 QFMKKLLTCNGVYLNPPPGQDHLSPEAEEITMISIQL-----AARFLFTTGFHTKKIVRGSASDW 2075
                              .:..:|.....||:..:.|     ...:.:.......||.|...|..
  Fly   808 ------------------EETRVSRLGRHITVTDLALPDLYKPRVYFYNPSLKKMKITRVYVSQS 854

Mouse  2076 YDALCILLR--HSKNVRFWFA-----HNVLFNVS-NRFSEYLLECPS---AEVRGAFAKLIVFIA 2129
            ::...:|:.  ...||. .||     ..|.:|.| :...:.|..|..   .|:|.|....:.|:.
  Fly   855 FNINLVLMSAYEMLNVE-QFAPLSRCRLVAYNSSMDTIIQSLESCTDPALTELRAAQNYSLDFLL 918

Mouse  2130 HFSLQDGPCP----------------SPFASPGP---SSQAYDNLSLSDHLLRAVLNLLRREVSE 2175
            .:..:|....                |..|..||   .|.|.:. ..||.|.|::  .||..:||
  Fly   919 EYRAEDQEFEVYPPNGITWYVFKVDLSTMAMDGPFLVYSAARER-EASDVLRRSI--ALRLHISE 980

Mouse  2176 HGRHLQQYFNLFVMYANLGVAEKTQLLKLSVPATFMLVSLDEGPGP---------------PIKY 2225
                 ||:.              ...::.:||..|  ||.|..|.|               .|.|
  Fly   981 -----QQFL--------------LATVRATVPKAF--VSYDPHPTPEALQHLQNMANTQFKSITY 1024

Mouse  2226 QY--------AELGKLYSVVSQLIRCCN----VSSRMQSSI-NGNPSLPNPFG---------DPN 2268
            .|        |.|..|.....:.:.|.:    |.:.|.:.: .|:.|..|.:.         :| 
  Fly  1025 FYLNVPNTDAATLEMLGVPTVESVECASGGDVVDAAMMNGVAPGHMSSSNDYDWRRYKRDLVEP- 1088

Mouse  2269 LSQPIMPIQQNVVDILFVRTSYVKKIIEDCSNSDETVKLLRFCCWEN--------PQFSSTVLSE 2325
            :||| .|...:            :...||.|.||....|:.   .:|        .|.|||..|.
  Fly  1089 MSQP-SPSHGH------------ESNSEDSSLSDGDRTLVE---TDNMAHRGGGDSQVSSTSHSP 1137

Mouse  2326 LLWQVAYSYTYELRPYLDLLLQILLIEDSWQTH----RIH-----NALKGIPDDRDGLFDTIQRS 2381
                                 |:...||...:|    |:|     |......|..|.|.  :..|
  Fly  1138 ---------------------QLSSPEDEAASHDAMMRVHAYCNGNGSYAAADVVDPLL--LPTS 1179

Mouse  2382 KNH-YQKRAYQCIKCMVALFSSC------------PV-AYQILQGN----GDLKRKWTWAVEWLG 2428
            .|| :.....:|:. :|...||.            |. ||::|.|.    |..|:.    :|.|.
  Fly  1180 TNHFFYATKVECVD-VVGTGSSSGHQSDEEAQLRKPTRAYKLLVGTHMRMGAFKKH----IEQLI 1239

Mouse  2429 D------ELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVKKA- 2486
            .      :|:|:        ..||.|    :|:.::...|....:..:.|.|..|  |:|.|.. 
  Fly  1240 QVPAAHFKLQRK--------HDNNLS----NNQNNSLVHLIEGETLTVELGKTLE--PDEFKAKI 1290

Mouse  2487 --TSLQEIEMEESKEP 2500
              ..|.:|:.|.||.|
  Fly  1291 HFLRLADIDNETSKLP 1306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp9xXP_006527649.1 Ubl1_cv_Nsp3_N-like <905..969 CDD:475130
peptidase_C19C 1560..1963 CDD:239124 119/458 (26%)
DUF3517 2102..2481 CDD:463438 97/479 (20%)
Usp47NP_523937.2 DUF4045 <122..249 CDD:433066 30/188 (16%)
peptidase_C19C 394..780 CDD:239124 119/457 (26%)
USP47_C 1300..1534 CDD:466158 4/7 (57%)
Blue background indicates that the domain is not in the aligned region.

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