Protein Alignment Upk1b and lbm

DIOPT Version :9

• Sequence 1: NP_849255.2
• Gene: Upk1b / 22268
• MGIID: 98912
• Length: 260
• Species: Mus musculus
• Sequence 2: NP_001260757.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Alignment Length: 247
• Identity: 49/247 - (19%)
• Similarity: 87/247 - (35%)
• Gaps: 74/247 - (29%)

Mouse    16 IFGHVIVGMCG-IALTAECIFFVSDQHSLYPLLEATNNDDIFGAAWIGMFVGICLFCLSVLAIVG 79
            :.|.:..|..| ||..|:                 |..::...||:|.     |...| |.|::|
  Fly    18 VLGFLAAGAIGWIAYNAD-----------------TETEEFVIAAYIA-----CSLIL-VFALLG 59

Mouse    80 IMKSNRKILL-----AYFIMMFIVYGFEVASCITAATQRDFFTTNLFLKQMLMRYQNNSPPTNDD 139
            |..:.|:.::     |.|:::..:... |::|             |||.:..::   :.....:.
  Fly    60 IFAAIRESVVLTATSAVFLLILAILQI-VSTC-------------LFLHEFDVK---SGRDMVEV 107

Mouse   140 EWKNNGVTKTWDRLMLQDHCCGVNGPSDWQKYTSAFRVENNDADYPWPRQCCV-MDKLKEPLNLD 203
            .|:.|.:    |.|..:..|||.:...|:...:...           |..|.. :.:..:.|.||
  Fly   108 AWQANNM----DSLQQKHECCGQSSAQDYIHLSLLI-----------PPSCYADLQQTPDHLYLD 157

Mouse   204 ACKLGVPGYYHSQGCYELISGPMDRHAWGVAW--FGFAILCWTFWVLLGTMF 253
            .|...|..:|.|.....:|          |:|  ..|.::|:...|.|...|
  Fly   158 GCIEKVQSFYESDKLRFII----------VSWVLVAFELICFALAVFLAISF 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Upk1b	NP_849255.2	uroplakin_I_like_LEL	120..230	CDD:239409	21/110 (19%)
lbm	NP_001260757.1	Tetraspannin	8..198	CDD:278750	48/244 (20%)
		tetraspanin_LEL	<109..169	CDD:239401	16/74 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900