Protein Alignment Usp4 and not

DIOPT Version :9

• Sequence 1: XP_006511759.1
• Gene: Usp4 / 22258
• MGIID: 98905
• Length: 967
• Species: Mus musculus
• Sequence 2: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Alignment Length: 642
• Identity: 115/642 - (17%)
• Similarity: 188/642 - (29%)
• Gaps: 312/642 - (48%)

Mouse   295 PHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGE----IAEAY 355
            |:...||.||.|||.|||||..:|.|.:|..|::||:.|.::.        |.|..    :.|.
  Fly   151 PNQTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDC--------GSKSSHKCLVCEV- 206

Mouse   356 AELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEP 420
            :.|.::.:||..:.::.......:...|...:||:|||:.|.....||.||.  :.||.|...|.
  Fly   207 SRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHR--HCVKAKAEHES 269

Mouse   421 K-DANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPL 483
            | :::|......:..:..:|.....:.|:| .|.|:.:|.:||..|..||.|:|||..::|.|
  Fly   270 KSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDL-- 332

Mouse   484 KKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSGIAAENMVVTDVYNHRFHKIFQ 548
                                                                             
  Fly   333 ----------------------------------------------------------------- 332

Mouse   549 MDEGLSH--ITPRDDIFVYEVCNTSMDGSECITLPVYFREKKSRPSSASSGAVLYGQPLLVSVPK 611
             .|..:|  :||:
  Fly   333 -GETTTHGGVTPK---------------------------------------------------- 344

Mouse   612 HKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPGACNGSRSSYEGDEEEEMDHQEEGKEQLSE 676
                                                                             
  Fly   345 ----------------------------------------------------------------- 344

Mouse   677 VEGSGEDDQGDDHSESAQKVKGQPRHKRLFTFSLVNSCGTADINSLATDGKLLKLNSRSTLAIDW 741
                                                                             
  Fly   345 ----------------------------------------------------------------- 344

Mouse   742 DSETRSLYFDEQESECFSPQACEKHLSMSQPQKKKKAAVALRECIELFTTMETLGEHDPWYCPTC 806
                                                   .|.:|:|.:|..|.||......|.||
  Fly   345 ---------------------------------------TLIDCLERYTRAEHLGSAAKIKCSTC 370

Mouse   807 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDR--SARPYVY 869
            |.:|::||:|.|.:||.::..|||||.::.....|:.:.::|||. .:|:.|:.::  :...:.:
  Fly   371 KSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVE-FDMTPFMSEKKNAYGDFRF 434

Mouse   870 DLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQR 926
            .|.||.||.|.:..||||||.::: ...|...||..:::||..|::....|:|||.:
  Fly   435 SLYAVVNHVGTIDTGHYTAYVRHQ-KDTWVKCDDHVITMASLKQVLDSEGYLLFYHK 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp4	XP_006511759.1	UBP12	35..927	CDD:227847	115/642 (18%)
not	NP_001287106.1	zf-UBP	46..103	CDD:307999
		Peptidase_C19D	158..489	CDD:239125	111/632 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1591
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.940