DRSC/TRiP Functional Genomics Resources

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Protein Alignment LNX2 and inaD

DIOPT Version :10

Sequence 1:NP_699202.1 Gene:LNX2 / 222484 HGNCID:20421 Length:690 Species:Homo sapiens
Sequence 2:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster


Alignment Length:465 Identity:93/465 - (20%)
Similarity:156/465 - (33%) Gaps:139/465 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   331 NSPREEIFQVALHKRDSGEQLGIKLVR-------RTDEPGVFILDLLEGGLAAQDGRLSSNDRVL 388
            ::|..|:..:....:...:..||.:||       .|...|:||..::....|...|||...||:|
  Fly    20 HNPFPELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRIL 84

Human   389 AINGHDLKYGTPELAAQIIQASGERVNLTI------------ARP---GKPQPGNTIRE------ 432
            ::||.|::..|.:....:|:.:..::.|.|            :.|   |..|..|...:      
  Fly    85 SLNGKDVRNSTEQAVIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSNGYMQAKNKFNQEQTTNN 149

Human   433 ------------------AG-NHSSSSQHHTPPPYYSRPSSH-----------KDLT-------- 459
                              || |...|.|........|....|           :|:|        
  Fly   150 NASGGQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADEDDEDTRDMTGRIRTEAG 214

Human   460 ---------QC-VTCQEK----------------------------HITVKKEPHESLGMTVAGG 486
                     .| :..|||                            .|.|:::..:.||:.:||.
  Fly   215 YEIDRASAGNCKLNKQEKDRDKEQEDEFGYTMAKINKRYNMMKDLRRIEVQRDASKPLGLALAGH 279

Human   487 RGSKSGELPIFVTSVPPHGCLARDGRIKRGDVLLNINGIDLTNLSHSEAVAMLKASAASPAVALK 551
            :..:  ::..||..|.|:|.|. ...||.||.::.:||..|.|..|..|.|:.|.......    
  Fly   280 KDRQ--KMACFVAGVDPNGALG-SVDIKPGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKL---- 337

Human   552 ALEVQIVEEATQNAE--------EQPSTFSENEYDASWSPSWVMWLGLPSTLHSCHDIVLRRSYL 608
               |.|......|.|        :.|:...|.::.....|             ....:.:|:.  
  Fly   338 ---VMITSRRKPNDEGMCVKPIKKFPTASDETKFIFDQFP-------------KARTVQVRKE-- 384

Human   609 GSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKE 673
            |..|..::.| :........||..:..|:.|...| :|.|||::|||...|:..::.....:||.
  Fly   385 GFLGIMVIYG-KHAEVGSGIFISDLREGSNAELAG-VKVGDMLLAVNQDVTLESNYDDATGLLKR 447

Human   674 QRNKVTLTVI 683
            ....||:.::
  Fly   448 AEGVVTMILL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LNX2NP_699202.1 mRING-HC-C3HC3D_LNX2 45..89 CDD:319694
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..224
NPXY motif 208..211
PDZ1_LNX1_2-like 229..317 CDD:467165
PDZ2_LNX1_2-like 338..420 CDD:467166 22/100 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 418..455 11/76 (14%)
PDZ3_LNX1_2-like 467..554 CDD:467167 25/114 (22%)
PDZ4_LNX1_2-like 599..687 CDD:467168 21/85 (25%)
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276 21/85 (25%)
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160 26/92 (28%)
PDZ3_INAD-like 379..454 CDD:467277 20/78 (26%)
PDZ4_INAD-like 501..585 CDD:467278
PDZ5_INAD-like 596..674 CDD:467279
Blue background indicates that the domain is not in the aligned region.

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