| Sequence 1: | NP_699202.1 | Gene: | LNX2 / 222484 | HGNCID: | 20421 | Length: | 690 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_542985.4 | Gene: | Lnx2 / 140887 | MGIID: | 2155959 | Length: | 687 | Species: | Mus musculus |
| Alignment Length: | 691 | Identity: | 621/691 - (89%) |
|---|---|---|---|
| Similarity: | 647/691 - (93%) | Gaps: | 5/691 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MGTTSDEMVSVEQTSS-SSLNPLCFECGQQHWTRENHLYNYQNEVDDDLVCHICLQPLLQPLDTP 64
Human 65 CGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLLVLCPFSSVCKDVMQRCDL 129
Human 130 EAHLKNRCPGASHRRVALERRKTSRTQAEIENENGPTLLDPAGTLSPEADCLGTGAVPVERHLTS 194
Human 195 ASLSTWSEEPGLDNPAFEESAGADTTQQPLSLPEGEITTIEIHRSNPYIQLGISIVGGNETPLIN 259
Human 260 IVIQEVYRDGVIARDGRLLAGDQILQVNNYNISNVSHNYARAVLSQPCNTLHLTVLRERRFGNRA 324
Human 325 HNHSDSNSPREEIFQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLA 389
Human 390 INGHDLKYGTPELAAQIIQASGERVNLTIARPGKPQPGNTIREAGNHSSSSQHHTPPPYYSRPSS 454
Human 455 HKDLTQCVTCQEKHITVKKEPHESLGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDVL 519
Human 520 LNINGIDLTNLSHSEAVAMLKASAASPAVALKALEVQIVEEATQNAEEQPSTFSENEYDASWSPS 584
Human 585 WVMWLGLPSTLHSCHDIVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLKCGD 649
Human 650 MIVAVNGLSTVGMSHSALVPMLKEQRNKVTLTVICWPGSLV 690 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LNX2 | NP_699202.1 | mRING-HC-C3HC3D_LNX2 | 45..89 | CDD:319694 | 42/43 (98%) |
| modified RING-HC finger (C3HC3D-type) | 50..87 | CDD:319694 | 35/36 (97%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 198..224 | 19/25 (76%) | |||
| NPXY motif | 208..211 | 2/2 (100%) | |||
| PDZ | 230..316 | CDD:214570 | 81/85 (95%) | ||
| PDZ | 336..422 | CDD:214570 | 80/85 (94%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 418..455 | 24/36 (67%) | |||
| PDZ_signaling | 466..542 | CDD:238492 | 75/75 (100%) | ||
| PDZ_signaling | 599..683 | CDD:238492 | 83/83 (100%) | ||
| Lnx2 | NP_542985.4 | mRING-HC-C3HC3D_LNX2 | 46..90 | CDD:319694 | 42/43 (98%) |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 145..175 | 19/29 (66%) | |||
| NPXY motif | 207..210 | 2/2 (100%) | |||
| PDZ | 229..315 | CDD:214570 | 81/85 (95%) | ||
| PDZ_signaling | 336..418 | CDD:238492 | 76/81 (94%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 417..454 | 26/38 (68%) | |||
| PDZ_signaling | 463..539 | CDD:238492 | 75/75 (100%) | ||
| PDZ_signaling | 596..680 | CDD:238492 | 83/83 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83958831 | |
| Domainoid | 1 | 1.000 | 250 | 1.000 | Domainoid score | I19865 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H17737 | |
| Inparanoid | 1 | 1.050 | 1258 | 1.000 | Inparanoid score | I4037 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG43472 | |
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0011770 | |
| OrthoInspector | 1 | 1.000 | - | - | oto123717 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_106227 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR19964 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R9553 |
| SonicParanoid | 1 | 1.000 | - | - | X2365 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 18 | 18.290 | |||||