DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ugdh and sgl

DIOPT Version :9

Sequence 1:NP_033492.1 Gene:Ugdh / 22235 MGIID:1306785 Length:493 Species:Mus musculus
Sequence 2:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster


Alignment Length:476 Identity:319/476 - (67%)
Similarity:389/476 - (81%) Gaps:3/476 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNEARINAWNSPTLPIYEPGLKEVVESCRGKNLF 70
            |:|||||||||||||:|:|..||:|.:|:||.:..||..|||..||||||||.|||:.||..|||
  Fly     2 KVCCIGAGYVGGPTCAVMALKCPDIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKCRNVNLF 66

Mouse    71 FSTNIDDAIREADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVR 135
            |||:|:.||:||||:||||||||||.|.||||||||||:|:.||.|.:.:...|||.||||||||
  Fly    67 FSTDIETAIKEADLIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVR 131

Mouse   136 AAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQKAVRALCAVYE 200
            |||||..|..||.||.::..:|||||||||||||.||.|.|||||||:|||||.:||..|..:||
  Fly   132 AAESIMHILRANQKPGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEETPEGHQAVEKLSWIYE 196

Mouse   201 HWVPKEKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKF 265
            ||:||:.|||||||||||||||||||||||||||||:||:||||||||.|||.|:|:|.|||:||
  Fly   197 HWIPKQNILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGSKF 261

Mouse   266 LKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKK 330
            |:|||||||||||||:|||:|:||.|||||||.|||||||||:||:|||:.:||:||||||:||:
  Fly   262 LQASVGFGGSCFQKDILNLIYICENLNLPEVAAYWQQVIDMNEYQKRRFSQKIIESLFNTVSDKR 326

Mouse   331 IAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVS-ADDQVSRL 394
            ||||||||||:||||||:::|.:.:.|::|||.|.||||||..|||:.||:||.|: :.::|.:.
  Fly   327 IAILGFAFKKNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQIIDDLTHPSVTESPEKVKKA 391

Mouse   395 VTISKDPYEACDGAHALVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHSELQTIGFQI 459
            |.|..|||.|....||||||||||.|.:||::||::.|:|||:|||||::||  |..||.|||.:
  Fly   392 VQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILD--HERLQQIGFHV 454

Mouse   460 ETIGKKVSSKRIPYTPGEIPK 480
            :|||||.....:..:.|.:|:
  Fly   455 QTIGK
KYQRTGLLRSWGIVPQ 475

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
UgdhNP_033492.1 PLN02353 4..464 CDD:177986 314/458 (69%)
Disordered. /evidence=ECO:0000250|UniProtKB:O60701 88..110 19/21 (90%)
Allosteric switch region. /evidence=ECO:0000250|UniProtKB:O60701 129..135 5/5 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:O60701 161..165 3/3 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:O60701 220..224 3/3 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:O60701 267..273 4/5 (80%)
Important for formation of active hexamer structure. /evidence=ECO:0000250|UniProtKB:O60701 321..325 3/3 (100%)