DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubr1 and Ubr1

DIOPT Version :9

Sequence 1:NP_033487.2 Gene:Ubr1 / 22222 MGIID:1277977 Length:1757 Species:Mus musculus
Sequence 2:NP_001245723.1 Gene:Ubr1 / 32687 FlyBaseID:FBgn0030809 Length:1824 Species:Drosophila melanogaster


Alignment Length:1928 Identity:613/1928 - (31%)
Similarity:928/1928 - (48%) Gaps:286/1928 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 MDGAERMDVSPEPPLAPQRPASWW----------------------DQQVDFYT-AFLHHLAQLV 47
            ||..:..||...||.....|...|                      .:..|:.| |.:.....:.
  Fly     1 MDRYDMEDVVVAPPAECSSPLKEWRLKRQAGTLDRSDIIEFLKRESPKYFDYQTSATVKDTNVIT 65

Mouse    48 PEIYFAEMDPDLEKQEESVQMSILTPLEWYLFGEDPDICLEKLKHSG-AFQLCGKVFKSGETTYS 111
            .:..|.|   .|.|:|      |:..:..::.|::|...||||:..| ...:||||||:||.|||
  Fly    66 LKCMFKE---SLAKEE------IIDVVVEFMLGDNPSSALEKLRLEGNTATVCGKVFKNGEPTYS 121

Mouse   112 CRDCAIDPTCVLCMDCFQSSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCVDHEPGRAGTTKE 176
            ||:|.:|||||||::||:.|.|:.|:|||.||.|||.|||||.||||...:|..|...|....:.
  Fly   122 CRECGVDPTCVLCVNCFKRSAHRFHKYKMSTSGGGGCCDCGDDEAWKKDQYCELHLANRKNPLES 186

Mouse   177 SLHCPLNEEVIAQARRIFPSVIKYIVEMTIWEEEKELPP--ELQIREKN--------ERYYCVLF 231
            .:   |.:.|:.:....|.:::.:.|...      |:.|  .||..:.|        .:|..||:
  Fly   187 KI---LTDAVLERVEICFGAILAFCVSYL------EIEPNASLQCLDGNVEGGQVDGAQYCTVLY 242

Mouse   232 NDEHHSYDHVIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGVYATCQEAKEDIKSH------- 289
            |||.|::|.||.:|.:...|...:|.....|||:|||..||...:..|.:.|..|::.       
  Fly   243 NDESHTFDQVIQTLTKIAKCRAKDAMEIVAAIDREGRAVVKCDTFEECNKLKVSIENQMILPTSL 307

Mouse   290 -SENVSQHPLHVEVLHSVVMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLVEEPGSENPCLIS 353
             |...:...|...|||...:|.|:|||:|..|..:.:.....||:.|.:  ||:.. .|..| |.
  Fly   308 VSTARNNQSLRTSVLHIGAVACQQFALQLLGWFQEFLVRHYLFRKTFSE--LVQRK-QETFC-IR 368

Mouse   354 RLMLWDAKLYKGARKILHELIFSSFFMEMEYKKLFAMEFVKYYKQLQKEYISDDHERSISITALS 418
            .::.:|.||:|.||...|.|:.|...||.:.|.:.|.||.:.|..:.:::|||||:.:.||.:||
  Fly   369 HILEYDVKLWKTARTCWHRLLISGMLMEYDNKMILAQEFSRRYATIVEDFISDDHDHAFSIVSLS 433

Mouse   419 VQMLTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQG--YSQDKLGRVYAVICDLKY 481
            ||:.|||::|.|||..:.:...:..|...|..|...||...:|..  .|.....|...::.||:|
  Fly   434 VQLFTVPSIAHHLIAHEGIFDKLLHTFYHVAIEKFIRNKTLHFSKNIASLTFFKRANYILYDLRY 498

Mouse   482 ILISKPVIWTERLRAQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQMQLKNIL 546
            :|..||.:.:..||..||||.|:.:::|..|||||.:.||.|||::.:|:||.|..:.::|...:
  Fly   499 LLSLKPDVLSNDLRNGFLEGCRALMRVLNVMQGMESMTRQTGQHMDYEPEWECAFNLHIKLATTI 563

Mouse   547 LMFQEWCACDEDLLLVAYKECHKAVMRCSTNFMSSTKTVVQ---LCGHSLETKSYKVSEDLVSIH 608
            ....:|.:.|..||...||...:|::  |.:|:...:.|:|   :..|......|.:|...||||
  Fly   564 SQVIDWASGDVKLLRKLYKMTMRALV--SNSFIVGGEKVMQPKKVADHVANCLVYDISVQPVSIH 626

Mouse   609 LPLSRTLAGLHVRLSRLGAISRLHEFVPFDGFQVEV-----------LVEYPLRCL-VLVAQVVA 661
            |||||..||:::   .|||    |: :.:||.|.|.           ::| |:.|. .::|||.|
  Fly   627 LPLSRFFAGIYL---HLGA----HD-LTYDGLQTETEALSIKLTPREIIE-PVLCTQAMIAQVGA 682

Mouse   662 EMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASIMDPNKFLLLVLQRYE----LTDAFN 722
            .:|||||.:|:.|:::|::|:||.||.|:||..||||||:|:.|:||:.||.|:.    |.:.:.
  Fly   683 GLWRRNGYTLLHQLYFYRNVRCRVEMLDRDIACLQIGASLMESNEFLIHVLNRFNTIPWLQENYW 747

Mouse   723 KTISTKD--QDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTREEVIMREITHLLCIEPMPHSA 785
            ..:|..:  .|:|:: .::.:|.|::||.|:|||::|||..||.|:.:.:||..||||:|..||.
  Fly   748 SLLSGNEMNDDIIRE-ASIFDEFLELLIVIIGERWMPGVSMVTEEDRLRKEIIQLLCIKPYSHSE 811

Mouse   786 IARNLPENE--NNETGLENVINKVATFKKP-GVSGHGVYELKDESLKDFNMYFYHYSKTQHSKAE 847
            ::|.||:..  |::...|.|||.||.|||| |....||||||:..||:||||||||:|...||||
  Fly   812 LSRALPDGNSGNSDNVFEEVINTVAVFKKPVGADSKGVYELKEHLLKEFNMYFYHYTKEDKSKAE 876

Mouse   848 HMQKKRRKQENKDEALPPPPPPEFCPAFSKVVNLLSCDVMMYILRTIFERAVDMESNLWTEGMLQ 912
            .:|::|||.:.:....|||..|:..|||:.:.|:|.|.|.:.|...|.|||::..|..:||..||
  Fly   877 ELQRERRKAKKQLVCCPPPMLPKLTPAFTPMANILQCPVFLNICSLIMERALNAYSRSFTESHLQ 941

Mouse   913 MAFHILALGLLEEKQQLQKAPEEEVAFDFYHKASRLGSSAMNAQNIQMLLEKLKGI---PQLESQ 974
            ...|:|...:.||      ..|......||.::...|           :||||:.:   |:||:.
  Fly   942 KVLHLLGYAIQEE------LSEHYPFLSFYERSQEYG-----------ILEKLEELARCPRLEAH 989

Mouse   975 KDMITWILQMFDTVKRLREK----------SCLVVATTSGLECVKSEEITHDKEKAERKRKAEAA 1029
            .|.:.|.::.|   |:|:.|          ||.... |.|...:.:||    :.:.||:.:|..|
  Fly   990 YDFVLWTIERF---KQLQAKQAPSDGRAGPSCSQQG-TGGKLSLSAEE----QAREERENRARLA 1046

Mouse  1030 RLHRQKIMAQMSALQKNFIETHKLMYDNTSEVTGKE---------DSIMEEESTSAVSEASRIA- 1084
            ...|..|||||...||:||.::..|:.:|...|.||         :.|..||...||:..|::| 
  Fly  1047 AERRAHIMAQMQKAQKSFISSNAEMFADTENETRKESASTGPMDWEDIPPEEEQGAVALESKVAC 1111

Mouse  1085 LGPKRGPAVTEKEVLTCILCQEEQEVKLENNAMVLSACVQKSTALTQHRGKPVDHLGETLDPLFM 1149
            |||.|.......:...||||.|...:......:|.||.||.|..                  :|.
  Fly  1112 LGPDRKFYHGTDDTFKCILCFENCAISRGGRQLVSSAFVQTSRV------------------IFT 1158

Mouse  1150 DPDLAH---GTYTGSCGHVMHAVCWQKYF---EAVQLSSQQRIHVDLFDLESGEYLCPLCKSLCN 1208
            .|:|.:   ..:...||||||..||.:||   |..:|....|....|....:.|:.||.|::|.|
  Fly  1159 TPNLRNSQSALHISCCGHVMHYSCWLEYFTNEEFKELRRPHRNRAALAQAANVEFQCPYCRTLSN 1223

Mouse  1209 TVIPIIPLQP--QKINSENAEALAQLLTLARWIQTVLARISGYNIK-HAKGEAPAVP-VLFNQGM 1269
            .:||:....|  ....|.| |:...|.:....:.|:...:.  |:| |.....|:|. :|...|:
  Fly  1224 AIIPVTETLPAFSAPPSPN-ESYLPLDSFVEIMSTLAIELG--NVKDHELTTLPSVSNILRLSGV 1285

Mouse  1270 --GDSTFE-----------FHSILSFGVQSSVKYSNSIKEMVILFATTIYRIGLK-VPPDELDPR 1320
              |.:.||           .|:....|::...|        .:|....|.:..|| .|..|....
  Fly  1286 VGGLAQFERSVQLIKNPPRLHADYIEGIEFLKK--------ALLNTMKIQQSHLKDHPAIESIEM 1342

Mouse  1321 VPMMTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQ-----FAVAQRTTCPQVLIHK 1380
            ||:: |.:|::|:||:|..|....|||...|..|..:..:.|::     .|:...|..|.:...:
  Fly  1343 VPIL-WDSCSYTLQALEIYLYAVEKPLKAELSMRHQSCARNLVRACSRSSALEWETDLPLLPPMR 1406

Mouse  1381 HLARLLSVILPNLQSENTPGLLSVDLFHVLV----GAV-LAFPSLYWDDTVDLQPSPLSSSYNHL 1440
            ..|...|.:|..:.::|...:|..|.|.|||    |.: |..|...:...:     |..|.:: .
  Fly  1407 SQAEFSSRLLDTIFNQNDTSVLEWDCFRVLVPFQFGVLNLMVPEKGYKTII-----PSGSMFD-F 1465

Mouse  1441 YLFHLITMAHMLQILLTTDTDLSSGPPLAEGEEDSEEARCASAFFVE------------------ 1487
            |:...:.:|.:.:.:|..|.:...    |:..|.:..:......::|                  
  Fly  1466 YIMQTMFLAQLTKAVLCFDVEKEK----AKRAEKAPNSELTQLDYIEQLPSRIRDNMIDFYRRYN 1526

Mouse  1488 --------------VSQHTDGLAGCG------APGWYLWLSL---RNGITPYLRCAALLFHYLLG 1529
                          |.:.::...|.|      ....:|.|.|   :..::.:|||:.|.:.:|..
  Fly  1527 IPARVLQKTKQKQLVEEESEENQGHGQTVVIPCESHHLALLLEYVQRQMSSFLRCSCLFYRFLTD 1591

Mouse  1530 VAPPEELFANSAEGEFSALCSYLSLPTNLFLLFQEYWDTI-RPLLQRWCGDPALLKSLKQKSAVV 1593
            |..| :.|.......|..:|.||.|...|.:.|.  .:|: ..::..:...|.:.:.::|:.   
  Fly  1592 VDFP-DTFPTDQPDRFDLMCQYLGLDPMLGVYFD--METVYATMMHSFASHPHIDREVEQRC--- 1650

Mouse  1594 RYPRKRNSL-IE-----LP------EDYSCLLNQASHFRCPRSADDERKHPVLCLFCGAILCSQN 1646
             .|..|.|| :|     ||      :|:|.|:|..|...||.:..:|.|.|.:||.||.|||.|:
  Fly  1651 -QPDARRSLQVEPCLRPLPRLKVLCDDFSDLINSVSDIFCPNNEREEMKTPTMCLICGLILCGQS 1714

Mouse  1647 ICCQEIVNGEEVGACVFHALHCGAGVCIFLKIRECRVVLVEGKARGCAYPAPYLDEYGETDPGLK 1711
            .|||..:....||||..||..|||.|.|||:||:|:||.: |:.:||..|.||||||||||.||:
  Fly  1715 YCCQPELGKVSVGACTHHAHACGAEVGIFLRIRDCQVVYL-GRGKGCFVPPPYLDEYGETDMGLR 1778

Mouse  1712 RGNPLHLSRERYRKLHLVWQQHCIIEEIARSQETNQMLFGFNW 1754
            |||||.||:..|||::|.|..|.:..||||..:...:.....|
  Fly  1779 RGNPLRLSQAAYRKIYLQWLGHGLHGEIARLNDNANVAAAAQW 1821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubr1NP_033487.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 6/17 (35%)
zf-UBR 99..166 CDD:280386 44/66 (67%)
ClpS 221..301 CDD:280736 27/95 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 842..868 11/25 (44%)
Ubr1NP_001245723.1 zf-UBR 109..176 CDD:280386 33/66 (50%)
ClpS 236..301 CDD:280736 21/72 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839988
Domainoid 1 1.000 738 1.000 Domainoid score I99
eggNOG 1 0.900 - - E1_KOG1140
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 911 1.000 Inparanoid score I367
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59210
OrthoDB 1 1.010 - - D34639at33208
OrthoFinder 1 1.000 - - FOG0001341
OrthoInspector 1 1.000 - - otm43776
orthoMCL 1 0.900 - - OOG6_101603
Panther 1 1.100 - - LDO PTHR21497
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1593
SonicParanoid 1 1.000 - - X1260
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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