DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12 and DUBAI

DIOPT Version :9

Sequence 1:NP_035799.1 Gene:Usp12 / 22217 MGIID:1270128 Length:370 Species:Mus musculus
Sequence 2:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster


Alignment Length:452 Identity:116/452 - (25%)
Similarity:172/452 - (38%) Gaps:117/452 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 EILMTVSKFASICTMGANASALEKEIGPEQFPVNEH--YFGLVNFGNTCYCNSVLQALYFCRPFR 64
            |:.:...|.........|..||.|.:.....|....  ..||||.|||||.|||||||.....|.
  Fly   319 ELYVATKKALQTYEPSPNCVALAKAMHENAQPWGRRNARVGLVNLGNTCYMNSVLQALAMTSDFS 383

Mouse    65 EKVLAYKSQPRKKENLLTC-----------LADLFHSIATQKKKVGVIPPKKFITRLRKENELFD 118
            .::|           |:.|           :|.:.||:..:      :.|.:.:...|..:  |.
  Fly   384 RQIL-----------LIECNSVLLMKVQQQIALMHHSLRYE------LTPSRVLNATRPPS--FT 429

Mouse   119 NYMQQDAHEFLNYLLNTIADILQEERKQEK----------QNGR-------------LRNGDV-- 158
            ..:|||:.|||.|||    |:|.|......          :.||             |.:|.:  
  Fly   430 PGLQQDSSEFLGYLL----DLLHEHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPY 490

Mouse   159 ----------DNEDN-NSTPDPT--------------------------WVHEIFQGTLTNETRC 186
                      .|.|| |..|.||                          .:.:.|.|.|:...||
  Fly   491 NSKDHELSSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQQVDQAKPPSTIDKTFAGKLSTTYRC 555

Mouse   187 LTCETISSKDEDFLDLSV----DVEQ----NTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
            |.|...|..::.|.:|.:    |.|.    |.|:...:..:.:.|.|..:.:|:|.:|:...:|.
  Fly   556 LNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAE 620

Mouse   244 KRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRM--YDLVAVV 306
            :.:.|.:.|..|.|.||:|||..:.|..|||.::|.....:.:..::.|:......  |||.|.|
  Fly   621 RHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDESVTVKMSAKDSLQEMSTVHYDLYAGV 685

Mouse   307 VHCGSGPNRGHYIAIVKSH-DFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 367
            ||.|...:.|||....... ..|..|:|::|..   ...||.:.|||     ..:.|||||:
  Fly   686 VHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTH---SKPEEMHNLTS-----PNTPYILFYK 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12NP_035799.1 UCH 38..366 CDD:278850 107/411 (26%)
Peptidase_C19G 40..367 CDD:239128 108/410 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..168 8/57 (14%)
DUBAINP_610784.1 UCH 358..738 CDD:278850 107/410 (26%)
Peptidase_C19H 359..739 CDD:239129 108/410 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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