DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GPC2 and dlp

DIOPT Version :10

Sequence 1:NP_689955.1 Gene:GPC2 / 221914 HGNCID:4450 Length:579 Species:Homo sapiens
Sequence 2:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster


Alignment Length:674 Identity:165/674 - (24%)
Similarity:272/674 - (40%) Gaps:142/674 - (21%)


- Green bases have known domain annotations that are detailed below.


Human     6 PLLLLLLP--LCP------GPGP------GPGSEAKVTRS---------CAETRQVLGARGYSLN 47
            |||||||.  |.|      ||.|      .|.....|..|         |:....:..|||....
  Fly    31 PLLLLLLTTHLPPTLQADNGPAPQVAALAAPNPAGGVAGSSIIDQFSPNCSAVTHIFQARGIDAI 95

Human    48 LIPPALISGEHLRVC--PQEYTCCSSETEQRLIRETEATFRGLVEDSGSFLVHTLAARHRKFDEF 110
            .||....:...||.|  |...|||:...|.|:..::.....|..:|..|.:...|.::..||.:.
  Fly    96 EIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLEGHTKDQISRMSGILGSKATKFKDI 160

Human   111 FLEMLSVAQHSLTQLFSHSYGRLYAQHALIFNGLFSRLRDFYGESGEGLDDTLADFWAQLLERVF 175
            |..:|..::.....:|..:||.:|.:::.:|:.||..|..::......|.:.:..|:..|.:::|
  Fly   161 FTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYFANGRVDLLEVMDKFFNTLYQKMF 225

Human   176 PLLHPQYSFPPDYLLCLSRLASSTDGSLQPFGDSPRRLRLQITRTLVAARAFVQGLETGRNVVSE 240
            .:|:.||:|..:|:.|:|....    .|:||||.|.:|.:||.|:.||.|.:.|.|.|...|..:
  Fly   226 TVLNTQYTFDENYMRCVSEHMK----ELKPFGDVPDKLSVQIKRSFVATRTYGQALTTASEVAKK 286

Human   241 ALKVPVSEGCSQALMRLIGCPLCRGVPSLMPCQGFCLNVVRGCLS-SRGLEPDWGNYLDGLLILA 304
            .|.|.::..|:.||.::..|..|:|... .||..:|:||::|||. ....:.:|.|:...:..:|
  Fly   287 VLNVRLNADCTGALTKMQHCGACKGYTE-KPCTNYCVNVIKGCLHYQHEFDSEWENFAMAMDKVA 350

Human   305 DKLQGPFSFELTAESIGVKISEGLMYLQENSAKVSAQVFQECGPP-------------------- 349
            ::|.|.|:..:..|.:.:||||.:|..|::...::.:|||.||.|                    
  Fly   351 ERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCGRPKLKKMKRSISPKLQGVQILN 415

Human   350 --DPVPA---------------RNRRAPPPREEAGRLWSMVTEEERPTTAAGTN----------- 386
              .||.|               |.|||..|..:.   .|....:|:....:|..           
  Fly   416 ARSPVEADTLDIDETLDEAIVLRERRAAEPGSQE---TSAQQSQEQGVGKSGNGGGGGGGNNRRQ 477

Human   387 ----------------------------------LHRLVWELRERLARMRGFWARLSLTVCGDSR 417
                                              |.|:|.::|:|:...:.||:.|..:||.:..
  Fly   478 QQRRKQQQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYKKFWSNLPHSVCSNED 542

Human   418 MAADASLEAAPCWTGAGRGRYLPPVVGGSPAEQVNNPELKVDASGPDVPTRR------RRLQLRA 476
            :|:.:.::.. ||.|....||:..:.    .|..:|||.    :|....|::      :...|:.
  Fly   543 IASSSDVDGM-CWNGHTIDRYMHSIT----TEHGSNPEF----TGNPASTKQTAQMASQLSHLKN 598

Human   477 ATARMKTAALGHDLDGQDADE-----DASGSGGGQQYADDWMAGAVAPPARP------PRPPYPP 530
            |...::.|..|.|::..:.:|     ..:|||.|.:..:|...|:...|..|      .||....
  Fly   599 AIVHLRNAYNGQDVEWSEQEELPYAGSGAGSGSGSEDDEDDDEGSGLGPFEPSHKPDVERPSVDA 663

Human   531 RRDGSGGKGGGGSARYNQGRSRSG 554
            ..|.....||.|....:..|..||
  Fly   664 DNDDDEDAGGRGHMPTHTSRPTSG 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPC2NP_689955.1 Glypican 29..512 CDD:460084 138/587 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..468 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 485..555 20/81 (25%)
dlpNP_524071.2 Glypican 79..619 CDD:460084 132/556 (24%)

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