DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubb and Ubi-p5E

DIOPT Version :9

Sequence 1:NP_001300913.1 Gene:Ubb / 22187 MGIID:98888 Length:305 Species:Mus musculus
Sequence 2:NP_001284937.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster


Alignment Length:304 Identity:304/304 - (100%)
Similarity:304/304 - (100%) Gaps:0/304 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

Mouse    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Mouse   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195

Mouse   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260

Mouse   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
            ||||||||||||||||||||||||||||||||||||||||||||
  Fly   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbbNP_001300913.1 Ubl_ubiquitin 1..76 CDD:340501 74/74 (100%)
Ubl_ubiquitin 77..152 CDD:340501 74/74 (100%)
Ubl_ubiquitin 153..228 CDD:340501 74/74 (100%)
Ubl_ubiquitin 229..304 CDD:340501 74/74 (100%)
Ubi-p5ENP_001284937.1 Ubiquitin 1..76 CDD:176398 74/74 (100%)
UBQ 1..72 CDD:214563 70/70 (100%)
Ubiquitin 77..152 CDD:176398 74/74 (100%)
UBQ 77..148 CDD:214563 70/70 (100%)
Ubiquitin 153..228 CDD:176398 74/74 (100%)
UBQ 153..224 CDD:214563 70/70 (100%)
Ubiquitin 229..304 CDD:176398 74/74 (100%)
UBQ 229..300 CDD:214563 70/70 (100%)
Ubiquitin 305..380 CDD:176398 304/304 (100%)
UBQ 305..376 CDD:214563 304/304 (100%)
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 143 1.000 Domainoid score I4620
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100667
Panther 1 1.100 - - LDO PTHR10666
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1586
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.840

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