DRSC/TRiP Functional Genomics Resources

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Protein Alignment Txn1 and Trx-2

DIOPT Version :9

Sequence 1:NP_035790.1 Gene:Txn1 / 22166 MGIID:98874 Length:105 Species:Mus musculus
Sequence 2:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster


Alignment Length:99 Identity:50/99 - (50%)
Similarity:65/99 - (65%) Gaps:1/99 - (1%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MVKLIESKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYS-NVVFLEVDVDDCQD 64
            ||..::.|......|..|..||||:||.||||||||||.|....|..::: |||.|:||||:|:|
  Fly     1 MVYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECED 65

Mouse    65 VAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLE 98
            :|.:..:..||||.|.|.|.||.||:|||.::||
  Fly    66 IAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLE 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Txn1NP_035790.1 Thioredoxin 4..103 CDD:365862 48/96 (50%)
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 46/82 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128202
Inparanoid 1 1.050 101 1.000 Inparanoid score I4965
Isobase 1 0.950 - 0.985475 Normalized mean entropy S646
OMA 1 1.010 - - QHG54229
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 1 1.100 - - LDO PTHR10438
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1557
SonicParanoid 1 1.000 - - X356
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.810

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