DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2AC1 and His2A:CG33829

DIOPT Version :9

Sequence 1:NP_734466.1 Gene:H2AC1 / 221613 HGNCID:18729 Length:131 Species:Homo sapiens
Sequence 2:NP_001027326.1 Gene:His2A:CG33829 / 3772447 FlyBaseID:FBgn0053829 Length:124 Species:Drosophila melanogaster


Alignment Length:122 Identity:110/122 - (90%)
Similarity:117/122 - (95%) Gaps:1/122 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILE 65
            |||||| |||.:.|:||||:|||||||||||||||||||||||:|||||||||||:|||.||:||
  Fly     1 MSGRGK-GGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLE 64

Human    66 LAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTE 122
            |||||:|||||||||||||||||||||||||||.|||||||||||||||||||||||
  Fly    65 LAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2AC1NP_734466.1 PTZ00017 1..131 CDD:185399 110/122 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 15/21 (71%)
His2A:CG33829NP_001027326.1 PTZ00017 16..124 CDD:185399 99/106 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 145 1.000 Domainoid score I4580
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3563
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53554
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000046
OrthoInspector 1 1.000 - - mtm8629
orthoMCL 1 0.900 - - OOG6_100077
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X55
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.770

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