DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tubb5 and betaTub60D

DIOPT Version :9

Sequence 1:NP_035785.1 Gene:Tubb5 / 22154 MGIID:107812 Length:444 Species:Mus musculus
Sequence 2:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster


Alignment Length:449 Identity:400/449 - (89%)
Similarity:428/449 - (95%) Gaps:8/449 - (1%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEA------TGGKY 59
            |||||::|||||||||||||||:||:|||||..|.|.|||||||:|:|||||||      :||||
  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKY 65

Mouse    60 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
            ||||||:|||||||:||||||:||:|||||||:||||||||||||||||||||||:||||||||.
  Fly    66 VPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEC 130

Mouse   125 ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSV 189
            |:||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||:
  Fly   131 ENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 195

Mouse   190 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLA 254
            |||||||||||||||||||||||||||::.|:|||||||||.|||||||||||||||||||||||
  Fly   196 HQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLA 260

Mouse   255 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRG 319
            ||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||
  Fly   261 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRG 325

Mouse   320 RMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQ 384
            ||||||||||||.||||||||||||||||||||||||||:||||:.|||||:|||||||||||||
  Fly   326 RMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQ 390

Mouse   385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEE 443
            |:||||||||||||||||||||||||||||||||||||||||:|||::|  |..|..:|
  Fly   391 FSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDE--FDPEVNQE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tubb5NP_035785.1 PLN00220 1..429 CDD:215107 393/433 (91%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 423..444 11/21 (52%)
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 400/449 (89%)
beta_tubulin 2..432 CDD:276956 390/429 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.830

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