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Protein Alignment Tubb3 and gammaTub23C

DIOPT Version :10

Sequence 1:	NP_075768.1	Gene:	Tubb3 / 22152	MGIID:	107813	Length:	450	Species:	Mus musculus
Sequence 2:	NP_476804.1	Gene:	gammaTub23C / 33501	FlyBaseID:	FBgn0260639	Length:	475	Species:	Drosophila melanogaster

Alignment Length:	451	Identity:	158/451 - (35%)
Similarity:	262/451 - (58%)	Gaps:	28/451 - (6%)

- Green bases have known domain annotations that are detailed below.

Mouse     3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPSG---NYVGDSDLQLERISVYYNEASSHKYVPRAI 64
            ||:.:|.||||||||.:||:.:..||||.|||   ::..|.   |:|..|::.:|....|:|||:
  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDG---LDRKDVFFYQADDDHYIPRAV 65

Mouse    65 LVDLEPGTMDSVRSGAFGHLFRPDNFIFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKECENC 127
            |:||||..::::....:..|:.|:|....:  .|||||||.| |::|.:|.:.|.|::.:|.:..
  Fly    66 LLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGS 129

Mouse   128 DCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSIHQ 191
            |.|:||.|.||:.||||||||:.::.::.:.||.:::.||||.|: .::||.||:|||:.|::.:
  Fly   130 DSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKR 194

Mouse   192 LVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVN 256
            |....|....:||.||..|....|.:..|::..:|:|||..||..||:||:|..:|.:|..|...
  Fly   195 LTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAP 259

Mouse   257 MVPFPRLHFFMPGFAPLTARG---SQQ---YRALTVPELTQQMFDAKNMMAACDP---RHGRYLT 312
            ::|.|:|||.|.|:.|||:..   :||   .|..||.::.:::...||||.:..|   .|..|::
  Fly   260 LIPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYIS 324

Mouse   313 VATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPP---RGLKMSSTFIGNSTAI 374
            :..:.:|.:...:|.:.:..|:.:..:.|:.|.|.:::||:....|   ...::|...:.|.|:|
  Fly   325 ILNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSI 389

Mouse   375 QELFKRISEQFTAMFRRKAFLHWYTGEGM---DEMEFTEAESNMNDLVSEYQQYQDATAEE 432
            ..||:|...|:..:.:|.|||..:..|.:   |..|..|:...::.||   |:|:.||.|:
  Fly   390 CSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLV---QEYEAATRED 447

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.