DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tuba4a and alphaTub84B

DIOPT Version :9

Sequence 1:NP_033473.1 Gene:Tuba4a / 22145 MGIID:1095410 Length:448 Species:Mus musculus
Sequence 2:NP_476772.1 Gene:alphaTub84B / 40848 FlyBaseID:FBgn0003884 Length:450 Species:Drosophila melanogaster


Alignment Length:448 Identity:422/448 - (94%)
Similarity:436/448 - (97%) Gaps:0/448 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRA 65
            ||||||:||||||||:|||||||||||||||||||||||||:|||||||.|||.|||||||||||
  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65

Mouse    66 VFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCT 130
            |||||||||:||:|.|.||||||||||||||||||||||||||||||||:|.||||||||:||||
  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130

Mouse   131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195
            ||||||:||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||
  Fly   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 195

Mouse   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLV 260
            ||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260

Mouse   261 PYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVP 325
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||||:||||||||
  Fly   261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 325

Mouse   326 KDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            ||||||||.|||||:||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390

Mouse   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGIDSYEDEDEGEE 448
            ||||||||||||||||||||||||||||||||||:|||||||||||:||.:.|.||.|
  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tuba4aNP_033473.1 PTZ00335 1..448 CDD:185562 421/446 (94%)
alphaTub84BNP_476772.1 PTZ00335 1..439 CDD:185562 416/437 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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