DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADGRF4 and adgrf1

DIOPT Version :10

Sequence 1:NP_722580.3 Gene:ADGRF4 / 221393 HGNCID:19011 Length:695 Species:Homo sapiens
Sequence 2:NP_001107298.1 Gene:adgrf1 / 100135087 XenbaseID:XB-GENE-6468452 Length:1304 Species:Xenopus tropicalis


Alignment Length:711 Identity:258/711 - (36%)
Similarity:381/711 - (53%) Gaps:98/711 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    11 CCLVFFLSTECSHY-----------------------RSKIHLKAGDKLQSPEGKPKTGRIQEKC 52
            |..|.:....|.:|                       |.::.:|.|       ..|..|.:.:..
 Frog   606 CFNVTYNCANCGNYTASCTITNSLGGTVKSAPMKLTLRQQVEIKCG-------APPGVGALGDII 663

Human    53 EGPCISSSNCSQPCAKDFHGEIGFTCNQKKWQKSA-ETCTSLSVEKLFKD---STGASRLSVAAP 113
            ..|| ||.|.      :..|...:||....||... :.|....:.:|..|   .||..    .|.
 Frog   664 TVPC-SSENI------NLTGNKSYTCTSTGWQAVVPDNCVLQVLNRLVSDVPSLTGPG----GAE 717

Human   114 SIPLHILDFRAPETIESVAQGIRKNCPFDYACITDMVKSSETTS-GNIAFIVELLKNISTDLSDN 177
            .:|:::.:..|..|.|                     |.:.|:| .||..:|.:|:.::| .:..
 Frog   718 ILPVYVANLSATVTAE---------------------KENITSSPSNIVTVVNILQQVTT-TTQT 760

Human   178 VTREKMKSYSEVANHILDTAAISNWAFIPNK-NASSDLLQSVNLFARQLHIHNNSENIVNELFIQ 241
            |..:.|:::....|.::|..:.:.|..:.|: :..:.||.||..|||:|.|.|.|.:|:|...:|
 Frog   761 VQPDVMQNFLTTVNVVVDDTSKNAWNNMNNRTDRGTQLLNSVEQFARKLQIDNGSISIINNSNVQ 825

Human   242 TKGFHINHNTS-EKSLNFSMSMNNTTEDILGMVQIPRQELRKLWPNASQAISIAFPTLGAILREA 305
            ..|...|.:.| .:|.|||.. ||.|    |.|.|.:..:..: .|.:..|:||:.||..|    
 Frog   826 LAGIIANSSRSYNESFNFSQG-NNLT----GSVLISKDSVSNM-ENNTNIITIAYATLKDI---- 880

Human   306 HLQNVSLPRQVNGLVLSVVLPERLQ---EIILTFEKINKTRNARAQCVGWHSKKRRWDEKACQMM 367
             |.|.| .:.|||||::.||..::.   :|.:.|:|.|:|.|... ||.|:.:...||...||.:
 Frog   881 -LLNTS-TKVVNGLVMTTVLSTQVPSNFKISMNFKKSNQTLNVPG-CVFWNLETNNWDSTGCQGV 942

Human   368 LDIRNEVKCRCNYTSVVMSFSILMSSKSMTDKVLDYITCIGLSVSILSLVLCLIIEATVWSRVVV 432
            .:..| |.|.|::   :.|||||||.|::...||||||.|||::||:||::|:.||..:|..|..
 Frog   943 NNAEN-VSCDCDH---LTSFSILMSYKAVDSIVLDYITYIGLAISIISLLICITIEGLIWKSVTK 1003

Human   433 TEISYMRHVCIVNIAVSLLTANVWFIIGSHFN-------IKAQDYNMCVAVTFFSHFFYLSLFFW 490
            .:.|||||||:||||||||.|::||||||..:       :...:.|.||:.|||:||||||||||
 Frog  1004 NKTSYMRHVCLVNIAVSLLIADIWFIIGSAISTLLKSDPLNTANSNACVSATFFTHFFYLSLFFW 1068

Human   491 MLFKALLIIYGILVIFRRMMKSRMMVIGFAIGYGCPLIIAVTTVAITEPEKGYMRPEACWLNWDN 555
            ||...|::.|.::.:...|.|||||.|.|.:||||||:|::.|||:|:|.:.|:...|||||:.:
 Frog  1069 MLTMGLILFYRLVYVLHDMSKSRMMAIAFTMGYGCPLLISIITVAVTQPGRTYLNGNACWLNFSD 1133

Human   556 TKALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSS-KSQDVVIIMRISKNVAILTPLLGLTWG 619
            :||.:||.:||..|:.||.|::.||.:...|||:|.. |.:|...::.|.|::||||||||||||
 Frog  1134 SKAFIAFVLPALTIILVNFIILAVVIIKLLRPSVGDKPKKEDKSTLIHIGKSIAILTPLLGLTWG 1198

Human   620 FGIATLIEGTSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALRMRMSSLKGKSRAAENA 680
            |||||:|...:|....|||.||:.||.||||||.::|.|:||:|..|.|..:..|:..:::
 Frog  1199 FGIATIIAPDALWVLGIFAALNSLQGLFILLFGCLLDKKVRDSLLSRFSLSRWSSQQTKSS 1259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADGRF4NP_722580.3 GPS 347..390 CDD:460350 14/42 (33%)
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 349..397 19/47 (40%)
7tmB2_GPR111_115 398..664 CDD:320660 142/273 (52%)
TM helix 1 400..425 CDD:320660 16/24 (67%)
TM helix 2 440..462 CDD:320660 17/21 (81%)
TM helix 3 474..501 CDD:320660 17/26 (65%)
TM helix 4 515..535 CDD:320660 11/19 (58%)
TM helix 5 555..584 CDD:320660 12/28 (43%)
TM helix 6 600..626 CDD:320660 19/25 (76%)
TM helix 7 631..656 CDD:320660 14/24 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 674..695 1/7 (14%)
adgrf1NP_001107298.1 SEA 169..251 CDD:460188
IG_like 277..359 CDD:214653
Ig strand B 283..287 CDD:409353
Ig strand C 295..299 CDD:409353
Ig strand E 325..329 CDD:409353
Ig strand F 339..344 CDD:409353
Ig_3 459..535 CDD:464046
GAIN <766..902 CDD:465137 49/147 (33%)
GPS 924..961 CDD:460350 14/40 (35%)
7tmB2_GPR116-like_Adhesion_VI 969..1243 CDD:320598 142/273 (52%)
TM helix 1 971..996 CDD:320598 16/24 (67%)
TM helix 2 1011..1033 CDD:320598 17/21 (81%)
TM helix 3 1052..1079 CDD:320598 17/26 (65%)
TM helix 4 1093..1113 CDD:320598 11/19 (58%)
TM helix 5 1133..1162 CDD:320598 12/28 (43%)
TM helix 6 1179..1205 CDD:320598 19/25 (76%)
TM helix 7 1210..1235 CDD:320598 14/24 (58%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.