DRSC/TRiP Functional Genomics Resources

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Protein Alignment FCGR2B and him-4

DIOPT Version :9

Sequence 1:XP_024309811.1 Gene:FCGR2B / 2213 HGNCID:3618 Length:324 Species:Homo sapiens
Sequence 2:NP_001024582.1 Gene:him-4 / 181187 WormBaseID:WBGene00001863 Length:5198 Species:Caenorhabditis elegans


Alignment Length:317 Identity:72/317 - (22%)
Similarity:119/317 - (37%) Gaps:93/317 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    43 TPAAPPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQ------PSYRF 101
            |...||..::..:.:....::..:|||:|..|..||.| |.||.:|..|  |.:      |:...
 Worm  2282 TVLVPPTIIMLDKDKNKTAVEHSTVTLSCPATGKPEPD-ITWFKDGEAI--HIENIADIIPNGEL 2343

Human   102 KAN--------NNDSGEYTCQTGQT--SLSDPVHLTVLSEWLVLQTPHL---------EFQEGET 147
            ..|        ..|:|:|||:...:  |:...|::.|::      .|.:         |.|:.|.
 Worm  2344 NGNQLKITRIKEGDAGKYTCEADNSAGSVEQDVNVNVIT------IPKIEKDGIPSDYESQQNER 2402

Human   148 IVLRCHSWKDKPLVKVTFFQNGK---SKKFSRSDPN------FSIPQANHSHSGDYHC--TGNIG 201
            :|:.|..:. :|..|:|:.:.||   |.||.::..|      |.:.:.:   |..|.|  |...|
 Worm  2403 VVISCPVYA-RPPAKITWLKAGKPLQSDKFVKTSANGQKLYLFKLRETD---SSKYTCIATNEAG 2463

Human   202 YTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAAVVALIYCRKKRISALPGYP---ECRE 263
            ......| |::.| |||.....|:                        :||:...|.|   .|..
 Worm  2464 TDKRDFK-VSMLV-APSFDEPNIV------------------------RRITVNSGNPSTLHCPA 2502

Human   264 MGETLPEKPGEYRLSQGFSDGSPGLPAGLEPGRRGLCKFSWEPGREQQWEDGWGSNR 320
            .|...|       ......||:     .:||..|.:   .::.||:.|.....||::
 Worm  2503 KGSPSP-------TITWLKDGN-----AIEPNDRYV---FFDAGRQLQISKTEGSDQ 2544

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
FCGR2BXP_024309811.1 Ig1_FcgammaR_like 50..128 CDD:143229 23/93 (25%)
Ig2_FcgammaR_like 132..214 CDD:319307 23/101 (23%)
him-4NP_001024582.1 IG_like 442..515 CDD:214653
IG 527..605 CDD:214652
Ig 628..694 CDD:319273
I-set 702..789 CDD:369462
I-set 793..881 CDD:369462
Ig 899..974 CDD:386229
I-set 1012..1081 CDD:369462
Ig 1109..1172 CDD:319273
Ig 1196..1263 CDD:319273
IG_like 1277..1358 CDD:214653
I-set 1373..1450 CDD:369462
Ig 1474..1544 CDD:386229
IGc2 1563..1628 CDD:197706
Ig 1651..1732 CDD:386229
Ig 1755..1818 CDD:319273
Ig 1839..1912 CDD:386229
Ig 1930..2002 CDD:386229
IG_like 2014..2095 CDD:214653
Ig 2094..2182 CDD:386229