DRSC/TRiP Functional Genomics Resources

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Protein Alignment HNRNPA3 and Rbp6

DIOPT Version :10

Sequence 1:NP_919223.1 Gene:HNRNPA3 / 220988 HGNCID:24941 Length:378 Species:Homo sapiens
Sequence 2:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster


Alignment Length:193 Identity:82/193 - (42%)
Similarity:117/193 - (60%) Gaps:3/193 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    28 PKE-PEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDA 91
            |.| |....|:||||||::|:.:|||::|.::|.:::.:||:||.|:|||||||||:|....||.
  Fly    21 PSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85

Human    92 AMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIE 156
            .:....|::||:.|:||.|..|.  ..|......|||||||:...|...:::.|||::|.||...
  Fly    86 VLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAM 148

Human   157 VMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGG 219
            :|.|:|:.:.|||.||||...|.|||:....:|.||....|.|||..|:.|..|...:.|..|
  Fly   149 LMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAG 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HNRNPA3NP_919223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 3/6 (50%)
RRM1_hnRNPA_like 36..113 CDD:409992 37/76 (49%)
RRM2_hnRNPA3 126..205 CDD:409996 35/78 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..225 5/16 (31%)
HnRNPA1 331..>347 CDD:463312
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..378
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 36/74 (49%)
RRM2_MSI 119..192 CDD:240769 31/72 (43%)
Blue background indicates that the domain is not in the aligned region.

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