DRSC/TRiP Functional Genomics Resources

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Protein Alignment HNRNPA3 and tra2

DIOPT Version :10

Sequence 1:NP_919223.1 Gene:HNRNPA3 / 220988 HGNCID:24941 Length:378 Species:Homo sapiens
Sequence 2:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster


Alignment Length:122 Identity:41/122 - (33%)
Similarity:66/122 - (54%) Gaps:6/122 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     6 PPGRPQPDSGRRRRRRGEEGHDPKE-PEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRD 69
            ||..|:..|||..|.| |..|..:| |:..|.:.:.||:..|:...:||.|.|:|.:....::.|
  Fly    68 PPPEPRHRSGRSSRDR-ERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVID 131

Human    70 PQTKRSRGFGFVTYSCVEEVDAA--MCARPHKVDGRVVEPKRAVS-REDSVKPGAHL 123
            .||:|||||.|:.:..:.:..||  .|: ..:||||.:....::: |..:..||.:|
  Fly   132 AQTQRSRGFCFIYFEKLSDARAAKDSCS-GIEVDGRRIRVDFSITQRAHTPTPGVYL 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HNRNPA3NP_919223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 12/28 (43%)
RRM1_hnRNPA_like 36..113 CDD:409992 24/79 (30%)
RRM2_hnRNPA3 126..205 CDD:409996
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..225
HnRNPA1 331..>347 CDD:463312
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..378
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 25/79 (32%)
Blue background indicates that the domain is not in the aligned region.

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