DRSC/TRiP Functional Genomics Resources

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Protein Alignment HNRNPA3 and CG12288

DIOPT Version :10

Sequence 1:NP_919223.1 Gene:HNRNPA3 / 220988 HGNCID:24941 Length:378 Species:Homo sapiens
Sequence 2:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster


Alignment Length:26 Identity:8/26 - (30%)
Similarity:11/26 - (42%) Gaps:5/26 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   340 SLSESELIGEL-----SADFDRSTYQ 360
            ||.|:..:|.:     ..|..|.|.|
  Fly    27 SLQENAFLGGIELPLAEIDLRRETIQ 52

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HNRNPA3NP_919223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
RRM1_hnRNPA_like 36..113 CDD:409992
RRM2_hnRNPA3 126..205 CDD:409996
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..225
HnRNPA1 331..>347 CDD:463312 3/6 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..378 8/26 (31%)
CG12288NP_609822.1 RRM1_RBM34 156..237 CDD:409828
RRM_SF 261..332 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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