DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpc6 and trp

DIOPT Version :9

Sequence 1:XP_006509912.1 Gene:Trpc6 / 22068 MGIID:109523 Length:949 Species:Mus musculus
Sequence 2:NP_476768.1 Gene:trp / 43542 FlyBaseID:FBgn0003861 Length:1275 Species:Drosophila melanogaster


Alignment Length:903 Identity:299/903 - (33%)
Similarity:451/903 - (49%) Gaps:188/903 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse   113 LSIEEERFLDAAEYGNIPVVRKMLEE---CHSLNVNCVDYMGQNALQLAVANEHLEITELLLKKE 174
            ||..|:.|:.:.|.|::|.|:|:|||   ....|:||.|.|.::||..|:.||:.::..:||  |
  Fly    29 LSDVEKNFILSCERGDLPGVKKILEEYQGTDKFNINCTDPMNRSALISAIENENFDLMVILL--E 91

Mouse   175 NLSRVGDALLLAISKGYVRIVEAIL-----NHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRF 234
            :...||||||.|||:.||..||.:|     ||               .|.|...:.|.|...:.|
  Fly    92 HNIEVGDALLHAISEEYVEAVEELLQWEETNH---------------KEGQPYSWEAVDRSKSTF 141

Mouse   235 SHDVTPIILAAHCQEYEIVHTLLRKGARIERPHDYFCKCTECSQKQKHDSFSHSRSRINAYKGLA 299
            :.|:||:|||||...|||:..||.:||.:..|||..|.|.||...|..||..||:||||||:.|:
  Fly   142 TVDITPLILAAHRNNYEILKILLDRGATLPMPHDVKCGCDECVTSQMTDSLRHSQSRINAYRALS 206

Mouse   300 SPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYRKLSMQCKDFVVGLLDLCRNTEEVEAIL 364
            :.:.::|||.|||:||.:||.||..|..:|.||:.:|.::....:||...|||..|.:.|:|.:|
  Fly   207 ASSLIALSSRDPVLTAFQLSWELKRLQAMESEFRAEYTEMRQMVQDFGTSLLDHARTSMELEVML 271

Mouse   365 NGDAETRQP----GDFGRPNLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKF 425
            |.:.|....    |.  |..|.||||||:|:.|.||||||.||.|.:|||:.|.|.|::..:.:.
  Fly   272 NFNHEPSHDIWCLGQ--RQTLERLKLAIRYKQKTFVAHPNVQQLLAAIWYDGLPGFRRKQASQQL 334

Mouse   426 LVVLAVAIGLPFLALIYWCAPCSKMGKILRGPFMKFVAHAASFTIFLGLLVMNAAD------RFE 484
            :.|:.:....|..:|.|..||.|:..|.:|.||:||:.|:.|:..|  |:::.||.      .||
  Fly   335 MDVVKLGCSFPIYSLKYILAPDSEGAKFMRKPFVKFITHSCSYMFF--LMLLGAASLRVVQITFE 397

Mouse   485 GTKLLPNETSTDNARQLFRMKTSCFSWM-------------------EMLIISWVIGMIWAECKE 530
               ||                  .|.||                   |:.||::::.:|:.|.|.
  Fly   398 ---LL------------------AFPWMLTMLEDWRKHERGSLPGPIELAIITYIMALIFEELKS 441

Mouse   531 IWTQGPKEYLFELWNMLDFGMLAIFAASFIARFMAF-------WHASKAQSIIDANDTLKDLTKV 588
            :::.|..||:.:|||::|:.....:....:.|..|:       |...     ||           
  Fly   442 LYSDGLFEYIMDLWNIVDYISNMFYVTWILCRATAWVIVHRDLWFRG-----ID----------- 490

Mouse   589 TLGDNVKYYNLARIKWDPTDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIF 653
                  .|:  .|..|.|.||.::|||.:|..:|.|:.::.:|...|...||||:||||.:.||.
  Fly   491 ------PYF--PREHWHPFDPMLLSEGAFAAGMVFSYLKLVHIFSINPHLGPLQVSLGRMIIDII 547

Mouse   654 KFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEA----------------------FTTVEESFKTL 696
            ||..|:.:|..||..|:..|..||...::|:.                      |:.:.|:.::|
  Fly   548 KFFFIYTLVLFAFGCGLNQLLWYYAELEKNKCYHLHPDVADFDDQEKACTIWRRFSNLFETSQSL 612

Mouse   697 FWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWK 761
            |||.|||.::.|..:.....|......:::|.|:|..:||||||||||:::|:|.|.:.||.|||
  Fly   613 FWASFGLVDLVSFDLAGIKSFTRFWALLMFGSYSVINIIVLLNMLIAMMSNSYQIISERADTEWK 677

Mouse   762 FARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLKFKKWMCELIQGQKQGFQEDAEMNKRNEEK 826
            |||::||.||||:|.|:|.||||.|:.|.|...|            |:|:..:..:.|.|     
  Fly   678 FARSQLWMSYFEDGGTIPPPFNLCPNMKMLRKTL------------GRKRPSRTKSFMRK----- 725

Mouse   827 KFGISGSHEDLSKFSLDKNQLAHNKQSSTRSSEDYHLNSFSNPPRQYQKIMKRLIKRYVLQAQID 891
                          |:::.|..|:                        |:||.|::||:...|..
  Fly   726 --------------SMERAQTLHD------------------------KVMKLLVRRYITAEQRR 752

Mouse   892 KESDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLAELIRK-LGERLSLEPKLEESR 948
            ::...:.|.::.|::|||||||:||||..:.|..|:.::.:| .|...:.:.|:.|.|
  Fly   753 RDDYGITEDDIIEVRQDISSLRFELLEIFTNNNWDVPDIEKKSQGVARTTKGKVMERR 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trpc6XP_006509912.1 trp 100..915 CDD:273311 288/867 (33%)
ANK repeat 150..177 CDD:293786 9/26 (35%)
ANK repeat 179..203 CDD:293786 16/28 (57%)
ANK repeat 230..265 CDD:293786 16/34 (47%)
trpNP_476768.1 trp 16..776 CDD:273311 288/867 (33%)
ANK 64..>168 CDD:238125 46/120 (38%)
ANK repeat 69..98 CDD:293786 10/30 (33%)
ANK repeat 99..135 CDD:293786 16/50 (32%)
ANK repeat 137..168 CDD:293786 14/30 (47%)
TRP_2 178..236 CDD:285535 29/57 (51%)
BASP1 938..1158 CDD:283191
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.770

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