DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppp1r13b and ASPP

DIOPT Version :9

Sequence 1:XP_006515859.1 Gene:Ppp1r13b / 21981 MGIID:1336199 Length:1122 Species:Mus musculus
Sequence 2:NP_788423.1 Gene:ASPP / 37422 FlyBaseID:FBgn0034606 Length:1069 Species:Drosophila melanogaster


Alignment Length:1170 Identity:363/1170 - (31%)
Similarity:521/1170 - (44%) Gaps:291/1170 - (24%)


- Green bases have known domain annotations that are detailed below.


Mouse    85 SPTESSEQGARQTQEQRTQRSVVNVPGEKRTENGVGNPRVELTLSELQDMAARQQQQIENQQQML 149
            |||    :|...|.|.:     :|||.             .||.:||:.||.||||||::|.|:|
  Fly    46 SPT----RGVVVTSEPK-----LNVPS-------------RLTSAELRAMALRQQQQIDSQHQLL 88

Mouse   150 VAKEQRLHFLKQQERRQQQSVSENEKLQKLKERVEAQENKLKKIRAMRGQVDYSKIMNGNLSAEI 214
            ..|||||.|||.||.|...:.:|.|:|::|:|||||||:||:::||:|||||..|..|..||.::
  Fly    89 ATKEQRLRFLKSQEVRSAVASAEGERLRRLRERVEAQESKLRRLRALRGQVDLQKTYNVTLSNDL 153

Mouse   215 ERFSAMFQEKKQEVQTAILRVDQLSQQLEDLKK------------GKLNGFQSYNGRLTGPAAVE 267
            :...|:|.||::|:..|:.:|:.|::|||:|::            |...|.||    |...|:.|
  Fly   154 DSIRALFSEKEKELSLAVAKVEALTRQLEELRRDRRCPVNILTAAGNGVGGQS----LPPQASRE 214

Mouse   268 LKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEVAMMDKRISELRERLYGKK----------- 321
            |::|.:||..||||:.:|:::|..|:|.|.:|..|:...|:||.||:.||..||           
  Fly   215 LEKLRRELMYRNQLSLQQDARLHMQREALQQRQAELRSTDQRIYELQTRLQRKKQANTHHQQQQQ 279

Mouse   322 ---------------------------------IQLNRVNGTSSPQ------------------- 334
                                             .||......::.|                   
  Fly   280 QQQQHQQQQHQQQHQQTTVQQQQQQQQQLHVQSAQLLAAAAAATAQQQQQHQQHQQQQQQQQQQS 344

Mouse   335 -SPLSTSGRVAAVGPYIQVPSTGGFPLPGDPVKPQSLTIASSAAHGRSKSDG-------YSRGRG 391
             |.|...|.|||:...:......           |....|::||.||::.:.       ::..:.
  Fly   345 ASNLGKHGGVAALKQQLLQKQVN-----------QLAAAAAAAAAGRARGNVAAVEPFIHTPQKS 398

Mouse   392 TSTWTVSDLDVRPHCGSSEHSASPLANSNDGNWPPLKQNSASVKSTQMTGDWKDSGMEGTLKQGA 456
            |.|.|.|.|.     |..:|:|: .||:|..|  .|.|:...||..|.:|.:             
  Fly   399 TITSTASYLS-----GGMKHAAA-TANTNQQN--QLIQDLTHVKLGQNSGFF------------- 442

Mouse   457 ISSQPLPLSALGA---TEKLGIEIGKGPPPIPGVGKPLPPSYGTYPSSGPLGPGSTSSLERRKEG 518
            ..|.|:|:::...   ..||..::...|                          :.:..|.||:.
  Fly   443 AGSVPVPVASSSCESDESKLAKKLLAAP--------------------------AKTEAELRKQA 481

Mouse   519 SLPRPGA--------GPPSRQKPAPLPPASNAPQPGSSQQI------QQRISVPPSPTYPPAGP- 568
            ......:        ||..|.:.|....|:.|....::.|.      |...:...|...|||.. 
  Fly   482 QTEAMDSTTHIYAEVGPKKRDREAAAAAAAAAAAAAAAAQAAAEAANQAATAAAASAISPPATAN 546

Mouse   569 ----PAFPTGDGKPELPLTVAIRPFLADKGSRPQ---SPRKGPQTVNSSSIYSMYLQQATPPKNY 626
                |...|........|...:......|.|:.|   ..:|...:|.|.::.....||       
  Fly   547 ASKIPKSTTSSSSSASALISKLNQQATAKESQDQQQSQAKKNEISVTSETLSERNTQQ------- 604

Mouse   627 QPPAH----GTLNKSVKAVYGKPVLPSGSASPSPLPFLHGSLGTGTAQPQPPSDSAEKEPEQEGP 687
            |...|    |.::|||      .:..|.::.|     |...:......|:.|..|........|.
  Fly   605 QLTVHSMPLGAISKSV------ALAVSNASKP-----LQVQVSNVAVPPRKPISSVAPNSVSSGS 658

Mouse   688 SVPG-----------EGSTVESLPRPLSPTKLTPIVHSPLRYQSDADLEALRRKLANAPRPLKKR 741
            |:|.           ..:.|.:.|||..|.|  |...||                ...|.|::..
  Fly   659 SIPKMITYSPKVNRVAPNVVMTDPRPALPPK--PSKMSP----------------TEQPSPVEAN 705

Mouse   742 SSITEPEGPGGPNIQKLLYQRFNTLAGGMEGTPFYQPSPSQDFVGTLADMDNGNTNANGNLDEPF 806
            :| ....|.|..........:..|...|::                       :.|.|.||  |.
  Fly   706 TS-GSAGGAGSGAASASTANKTQTATFGLQ-----------------------SLNINDNL--PI 744

Mouse   807 PPRPTA----PLPEE-LAPSSDANDNELPSPEPEELICPQTTHQTA-EPTEDNNNNVAPVPSTEQ 865
            ..:|..    ||.|: ...||.::.|....|...:|...:.:..:| :|||:       :|.|..
  Fly   745 KAKPLTIRKQPLFEQPRLKSSQSSSNGQQKPPLLQLQNQRKSEPSARQPTEN-------LPDTSP 802

Mouse   866 IPSPVAEAPSEED--QVPPAPLSPVIHPPAASASKRTNLKKPN-SERTGH-----GLRVRFNPLA 922
            ..||.:|:.::|.  .|.|:..:.......::.|..|.:...| .||||:     |.||.|:|||
  Fly   803 QHSPSSESSADETDRMVAPSITTSQQETSTSATSTTTTVTTSNIKERTGNGKPKLGRRVSFDPLA 867

Mouse   923 LLLDASLEGEFDLVQRIIYEVEDPSKPNDEGITPLHNAVCAGHHHIVKFLLDFGVNVNAADSDGW 987
            ||||||||||.:||::...:|.:||..||||||.||||:||||..|||||::||.:|||.|||||
  Fly   868 LLLDASLEGELELVKKTAMQVANPSAANDEGITALHNAICAGHIDIVKFLVEFGCDVNAQDSDGW 932

Mouse   988 TPLHCAASCNSVHLCKQLVESGAAIFASTISDIETAADKCEEMEEGYIQCSQFLYGVQEKLGVMN 1052
            ||||||||||::.:.|.||||||.:||||:||.||.|:||||.|||:..||::||.:|||||:::
  Fly   933 TPLHCAASCNNLSMVKFLVESGACLFASTLSDHETPAEKCEEDEEGFDGCSEYLYSIQEKLGILH 997

Mouse  1053 KGTVYALWDYEAQNSDELSFHEGDAITILRRKDENETEWWWAR-LGDREGYVPKNLLGLYPRIKP 1116
            .|.|||::.|||||.||||||..:.:.:||:.|:.|.|||||| ....|||||:||||||||:.|
  Fly   998 NGDVYAVFSYEAQNGDELSFHVNEPLIVLRKGDDAENEWWWARNAAGEEGYVPRNLLGLYPRVPP 1062

Mouse  1117  1116
              Fly  1063  1062

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity