Protein Alignment OR4C6 and or30by3

DIOPT Version :9

• Sequence 1: NP_001004704.1
• Gene: OR4C6 / 219432
• HGNCID: 14743
• Length: 309
• Species: Homo sapiens
• Sequence 2: NP_001034713.1
• Gene: or30by3 / 554780
• ZFINID: ZDB-GENE-010308-3
• Length: 328
• Species: Danio rerio
• Alignment Length: 302
• Identity: 78/302 - (25%)
• Similarity: 145/302 - (48%)
• Gaps: 19/302 - (6%)

Human     8 TEFILLGLTE-NLELWKIFSAVFLVMYVATVLENLLIVVTIITSQSLRSPMYFFLTFLSLLDVMF 71
            |||.|||... :.:.:.....:||.:|:..:..|:.|:..|...:||:.|.|.....|::.|:.|
Zfish    19 TEFYLLGFPGLHPDYYGALGTLFLFVYLTLLGGNIFIIAFIAYEKSLQKPTYVIFCNLAVCDLTF 83

Human    72 SSVVAPKVIVDTLSKSTTISLKGCLTQLFVEHFFGGVGIILLTVMAYDRYVAICKPLHYTIIMSP 136
            .:||.|:.|........|||...|..|:|.......|...::.:|..||:|||..||.|.::::.
Zfish    84 GTVVLPQAIAMYFININTISFNLCFVQMFFLFCLSNVSSFIILLMTIDRFVAIRNPLRYCVLITN 148

Human   137 RVCCLMVGGAWVGGFMHAMIQLLF--MYQIPFCGPNIIDHFICDLFQLLTLACTDTHILGLLVTL 199
            :...:..|..|.  |:..::..:.  .|..|:|..|::...:|:...::.|:|.|     :...|
Zfish   149 KTVFIACGVIWT--FITPLMAFIVYQSYDEPYCASNVVTQILCERNVVIKLSCRD-----IRQKL 206

Human   200 NSGMMCVAIFLI-----LIASYTVILCSLKSYS-SKGRHKALSTCSSHLTVVVLFFVP--CIFLY 256
            .....|..|.::     ::.|:..|..|:.:.| |:.|:|..|||...|.::.|.|:.  .:::|
Zfish   207 YLTFACTVIIVVGPPIFILCSFIGIFTSVFNISNSQARYKTFSTCFPQLFLICLHFLSKLVVYVY 271

Human   257 MRPVVTHPIDK-AMAVSDSIITPMLNPLIYTLRNAEVKSAMK 297
            ...|...|..: |:.:...::.|::||:||..:..|:|.|::
Zfish   272 DVTVTMSPSFRIAITLCSCLLPPVVNPMIYCFKTKEIKDAIR 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
OR4C6	NP_001004704.1	7tmA_OR4A-like	23..289	CDD:320605	69/276 (25%)
		TM helix 1	24..50	CDD:320605	6/25 (24%)
		TM helix 2	57..83	CDD:320605	8/25 (32%)
		TM helix 3	95..125	CDD:320605	9/29 (31%)
		TM helix 4	138..159	CDD:320605	3/20 (15%)
		TM helix 5	193..223	CDD:320605	5/34 (15%)
		TM helix 6	229..259	CDD:320605	9/31 (29%)
		TM helix 7	264..289	CDD:320605	7/25 (28%)
or30by3	NP_001034713.1	7tm_4	41..312	CDD:304433	71/277 (26%)
		7tm_1	51..301	CDD:278431	64/256 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
NCBI	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910