DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tnc and Ten-m

DIOPT Version :9

Sequence 1:NP_001356140.1 Gene:Tnc / 21923 MGIID:101922 Length:2110 Species:Mus musculus
Sequence 2:NP_001262211.1 Gene:Ten-m / 40464 FlyBaseID:FBgn0004449 Length:3349 Species:Drosophila melanogaster


Alignment Length:1978 Identity:416/1978 - (21%)
Similarity:646/1978 - (32%) Gaps:707/1978 - (35%)


- Green bases have known domain annotations that are detailed below.


Mouse   331 YCEEGFTGEDCGELT------------CPNDCQGRGQCEEGQCVCNEGFAGADCSEKRCPADCHH 383
            |.::|    |..|||            |||.|.|.|||..|.|.||.||.|.||||..||..|..
  Fly  1048 YNDDG----DVQELTFYAAVAEDMTQNCPNGCSGNGQCLLGHCQCNPGFGGDDCSESVCPVLCSQ 1108

Mouse   384 RGRCLNGQCECDDGFTGADCG---DLQCP-NGCSGHGRCVNGQCVCDEGYTGEDCSQRRCPN-DC 443
            .|...||:|.|:.|:.|.:|.   | :|. ..|||||.||:|:|.|..||.|:.|.:..||: :|
  Fly  1109 HGEYTNGECICNPGWKGKECSLRHD-ECEVADCSGHGHCVSGKCQCMRGYKGKFCEEVDCPHPNC 1172

Mouse   444 HNRGLCVQGKCICEQGFKGFDCSEM-----SCPNDCHQHGR--CVNGMCICDDDYTGEDCRDRRC 501
            ...|.|..|.|||::|:||.||:.|     .|..||..||.  .....|.|:..::|:||....|
  Fly  1173 SGHGFCADGTCICKKGWKGPDCATMDQDALQCLPDCSGHGTFDLDTQTCTCEAKWSGDDCSKELC 1237

Mouse   502 PRDCSQRGRCVDGQCICEDGFTGPDCAELSCPSDCHGHGRCVNGQCICHEGFTGKDCKEQRCPSD 566
            ..||.|.|||....|.|:..:.|..|....|...|:.||:|.||.|:|..|:.||.|..:.||:.
  Fly  1238 DLDCGQHGRCEGDACACDPEWGGEYCNTRLCDVRCNEHGQCKNGTCLCVTGWNGKHCTIEGCPNS 1302

Mouse   567 CHGQGRCE---DGQ--CICHEGFTGLDCG---QRSCPN----------DCSNQGQCVSGRC---- 609
            |.|.|:|.   :||  |.|:||:.|.|||   :.:|.:          ||.:...|.|..|    
  Fly  1303 CAGHGQCRVSGEGQWECRCYEGWDGPDCGIALELNCGDSKDNDKDGLVDCEDPECCASHVCKTSQ 1367

Mouse   610 ICNEGYTGIDCSEVSPPKDL-IVTEVTEETVNLAWDNEMRVTEYLIMYTPTHADGLEMQFRVPGD 673
            :|           ||.||.: ::.......:..::...|:   :||                  |
  Fly  1368 LC-----------VSAPKPIDVLLRKQPPAITASFFERMK---FLI------------------D 1400

Mouse   674 QTSTTIRELEPGVEYFIRVFAILEN------------KRSIPVSARVATYLPAPEGLKFKSIK-E 725
            ::|             ::.:|.||.            .||..:..||.|.|    |:....:: .
  Fly  1401 ESS-------------LQNYAKLETFNESIFWNYFNASRSAVIRGRVVTSL----GMGLVGVRVS 1448

Mouse   726 TSVEVEWDPLDIAFETWEIIFRNMNKEDEGEIT----KSLRRPETSYRQTGLAPGQEYEISLHIV 786
            |:..:|...| ...:.|..:..|    ..|.:|    ::..||::...|   .|..|..|...:|
  Fly  1449 TTTLLEGFTL-TRDDGWFDLMVN----GGGAVTLQFGRAPFRPQSRIVQ---VPWNEVVIIDLVV 1505

Mouse   787 KNNTRGPGLKKVTTTRLDAPSHIEVKDVTDTTALITWFKPLAEIDSIELSYGIKDVPGDRTTIDL 851
            .:.:...||...||....|..:    |:.....|.:|            .:|.:....||:.|  
  Fly  1506 MSMSEEKGLAVTTTHTCFAHDY----DLMKPVVLASW------------KHGFQGACPDRSAI-- 1552

Mouse   852 THEDNQYSIGNLRPDTEYEVSLISRRVDMASNPAKETFITGLDAPRNLRRVSQTDNSITLEWRNV 916
                            ..|..:|...:.:..        |||:...:..|.:...::|.|:   :
  Fly  1553 ----------------LAESQVIQESLQIPG--------TGLNLVYHSSRAAGYLSTIKLQ---L 1590

Mouse   917 KADIDSYRIKYAPISGGDHAEIDVPKSQQATTKTTLTGLRPGTEYGIGVSAVKGDK--ESDPATI 979
            ..|:                   :|      |...|..||      |.:..:..::  |:||.. 
  Fly  1591 TPDV-------------------IP------TSLHLIHLR------ITIEGILFERIFEADPGI- 1623

Mouse   980 NAATEIDAPKDLRVSETTQDSLTFFWTTPLAKFDRYRLN-YSLPTGQSMEVQLPKDATSHVLTDL 1043
                                ..|:.|.    :.:.||.. |.:.|..                 :
  Fly  1624 --------------------KFTYAWN----RLNIYRQRVYGVTTAV-----------------V 1647

Mouse  1044 EPGQEYTVLLIAEKGRHKSKPARVKASTEEVPSLENLTVTEAGWDGLRLNWTADDLAYEYFVIQV 1108
            :.|.:||                              ..|:..||......:..|::       :
  Fly  1648 KVGYQYT------------------------------DCTDIVWDIQTTKLSGHDMS-------I 1675

Mouse  1109 QEAN--NVETAHNFTV-PGNLRAADIPGLKVATSYRVSIYGVARGYRTPVLSAETSTGTTPN--L 1168
            .|..  |::..|.:.. .|.|:..|...:.:....|:.:..:..|::.|:...:.....|..  |
  Fly  1676 SEVGGWNLDIHHRYNFHEGILQKGDGSNIYLRNKPRIILTTMGDGHQRPLECPDCDGQATKQRLL 1740

Mouse  1169 GEVTVAEVGWDALTLNWTAPEGAYKNFFIQVLEADTTQTVQNLTVPGGLRS-VDLPGLKAATRYY 1232
            ..|.:|           .||:|:        |.......::.:...|.:|: |.|...:.:.||:
  Fly  1741 APVALA-----------AAPDGS--------LFVGDFNYIRRIMTDGSIRTVVKLNATRVSYRYH 1786

Mouse  1233 ITLRGVTQDFGTAPLSVEVLTEDLPQLGGLSVTEVSWDGLTLNWTTDDLAYKHFVVQVQEANN-- 1295
            :.|         :||.           |.|.|::..               .|.:::|::.|:  
  Fly  1787 MAL---------SPLD-----------GTLYVSDPE---------------SHQIIRVRDTNDYS 1816

Mouse  1296 --------VEAAQNLTVPGSLRAVDIPGLKADT----PYRVSIYG-----VIQGYRTPMLSTD-- 1341
                    |..:....:||.........|..|.    |..::|..     ...|....|:..|  
  Fly  1817 QPELNWEAVVGSGERCLPGDEAHCGDGALAKDAKLAYPKGIAISSDNILYFADGTNIRMVDRDGI 1881

Mouse  1342 VSTAREPEIGN-LNVSDVTP---------KSFNLSWTATDGIFDM-FTIEIIDSNRLLQTAEHNI 1395
            |||.    ||| ::.|...|         :..:|.|.....:..| .|:.|||.:.:|:..... 
  Fly  1882 VSTL----IGNHMHKSHWKPIPCEGTLKLEEMHLRWPTELAVSPMDNTLHIIDDHMILRMTPDG- 1941

Mouse  1396 SGAERTAHISGLPPSTDFIVYLSGIAPSIRTKTISTTATTEALPLLENLTISDTNPYGFTVSWTA 1460
                |...|||.|               :...|.||                             
  Fly  1942 ----RVRVISGRP---------------LHCATAST----------------------------- 1958

Mouse  1461 SENAFDSFLVTVVDSGKLLDPQEFTL----------SGTQRKLELRGLITGIGYEVLVSGFTQGH 1515
               |:|:.|.|   ...|:.||....          |.:||...:|    .||.:..::.|. |.
  Fly  1959 ---AYDTDLAT---HATLVMPQSIAFGPLGELYVAESDSQRINRVR----VIGTDGRIAPFA-GA 2012

Mouse  1516 QTK---------PLRAETITEAEPEVDNLLVSDATPDGFRLSWTADEGIFDSFVIRIRDTKKQSE 1571
            ::|         ...||.......:.:.:.....|||       :...|.|....|||....   
  Fly  2013 ESKCNCLERGCDCFEAEHYLATSAKFNTIAALAVTPD-------SHVHIADQANYRIRSVMS--- 2067

Mouse  1572 PQEISLP--SPERTRDITGLREATEYEI------ELYGISRGRRSQPVSAIATTAMGSPKEIMFS 1628
                |:|  ||.|           ||||      |:|..:  |..|.||.         :.|:..
  Fly  2068 ----SIPEASPSR-----------EYEIYAPDMQEIYIFN--RFGQHVST---------RNILTG 2106

Mouse  1629 DITENAATVSWRAPTAQVESFRITY-VPMTGGAPSMVTVDGTDTETRL----------VKLTPGV 1682
            :.|                 :..|| |..:.|..|.|| |....:..|          ::.|.|.
  Fly  2107 ETT-----------------YVFTYNVNTSNGKLSTVT-DAAGNKVFLLRDYTSQVNSIENTKGQ 2153

Mouse  1683 EYRVSVIAMKGFEE-SDPVSGTLITALDGPSGLLIANITDSEALAMWQPAIATVDSYVISYT--G 1744
            :.|:.:..||...| |.|.:..:.....||:|||...: ||           |..|||.:|.  |
  Fly  2154 KCRLRMTRMKMLHELSTPDNYNVTYEYHGPTGLLRTKL-DS-----------TGRSYVYNYDEFG 2206

Mouse  1745 ERVPEVTRTVSGNTVEYELHDLEPATEYILSI------FAEKGQQKSSTI-------------AT 1790
            .....||.|  |..:|         ..:.||:      .:|..|::.|.:             .:
  Fly  2207 RLTSAVTPT--GRVIE---------LSFDLSVKGAQVKVSENAQKEMSLLIQGATVIVRNGAAES 2260

Mouse  1791 KFTTDLDSPREFTATEVQSETALLTW-RPPRASVTGYLLVYES---------VDGTVKEVIVGPD 1845
            :.|.|:|.          |.|::..| ...:..|..|.::.|.         |....:..|.|  
  Fly  2261 RTTVDMDG----------STTSITPWGHNLQMEVAPYTILAEQSPLLGESYPVPAKQRTEIAG-- 2313

Mouse  1846 TTSYSLADLSPSTHYSARIQALSGSLRSKLIQTIFTTIGLLYPFPRDCSQAMLNGDTTSGL---- 1906
                .||:.....::..|.|.|....:||......|.:|         .:..:|||....|    
  Fly  2314 ----DLANRFEWRYFVRRQQPLQAGKQSKGPPRPVTEVG---------RKLRVNGDNVLTLEYDR 2365

Mouse  1907 ---YTIYINGDKTQALEVYCDMTS-------------------DGGGWIV----------FLRRK 1939
               ..:.:..||.:.|.|..|.||                   |..|.:|          :...:
  Fly  2366 ETQSVVVMVDDKQELLNVTYDRTSRPISFRPQSGDYADVDLEYDRFGRLVSWKWGVLQEAYSFDR 2430

Mouse  1940 NGR--EDFYRNWKAYAAGFGD------------RREEFWLGLDNL----SKITAQGQ---YELRV 1983
            |||  |..|.:.......|.|            ||.::.|..|:.    |..|.:|.   :.|:.
  Fly  2431 NGRLNEIKYGDGSTMVYAFKDMFGSLPLKVTTPRRSDYLLQYDDAGALQSLTTPRGHIHAFSLQT 2495

Mouse  1984 DL--------------------QDHGESAYAVYDRFS-----VGDAKSRYKLKVEGYSGTAGDSM 2023
            .|                    .|.|:....::...|     |.|...|.:..:.|.|.|     
  Fly  2496 SLGFFKYQYYSPINRHPFEILYNDEGQILAKIHPHQSGKVAFVHDTAGRLETILAGLSST----- 2555

Mouse  2024 NYHNGRSFSTYDKDTDSAITNCALSYKG 2051
            :|       || :||.|.:.:..:...|
  Fly  2556 HY-------TY-QDTTSLVKSVEVQEPG 2575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TncNP_001356140.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..91
EGF_2 222..247 CDD:285248
EGF_2 345..372 CDD:285248 16/38 (42%)
EGF_2 377..403 CDD:285248 10/25 (40%)
EGF_2 408..434 CDD:285248 14/26 (54%)
EGF_2 468..496 CDD:285248 9/34 (26%)
EGF_2 504..527 CDD:285248 9/22 (41%)
EGF_2 533..558 CDD:285248 11/24 (46%)
EGF_2 592..620 CDD:285248 7/41 (17%)
FN3 624..710 CDD:238020 15/98 (15%)
fn3 713..793 CDD:333790 15/84 (18%)
FN3 804..891 CDD:238020 10/86 (12%)
fn3 894..976 CDD:333790 11/83 (13%)
fn3 986..1064 CDD:333790 9/78 (12%)
fn3 1075..1147 CDD:333790 11/74 (15%)
fn3 1169..1246 CDD:333790 13/77 (17%)
fn3 1257..1336 CDD:333790 14/97 (14%)
fn3 1348..1417 CDD:333790 18/79 (23%)
fn3 1442..1519 CDD:333790 16/95 (17%)
fn3 1530..1610 CDD:333790 20/87 (23%)
fn3 1620..1699 CDD:333790 18/90 (20%)
fn3 1711..1785 CDD:333790 21/81 (26%)
fn3 1797..1869 CDD:333790 15/81 (19%)
Fibrinogen_C 1889..2098 CDD:278572 46/245 (19%)
Ten-mNP_001262211.1 TNFRSF 1069..1198 CDD:304602 60/129 (47%)
CRD2 1106..1151 CDD:276900 19/45 (42%)
EGF_2 1139..1162 CDD:285248 13/22 (59%)
Keratin_B2 1162..1330 CDD:279797 63/167 (38%)
EGF_2 1167..1194 CDD:285248 12/26 (46%)
DUF3844 1171..>1235 CDD:289707 23/63 (37%)
EGF_2 <1272..1294 CDD:285248 11/21 (52%)
NHL 1750..2065 CDD:302697 77/428 (18%)
NHL repeat 1784..1830 CDD:271320 12/80 (15%)
NHL repeat 1854..1888 CDD:271320 9/37 (24%)
NHL repeat 1911..1950 CDD:271320 12/43 (28%)
NHL repeat 1972..2005 CDD:271320 8/36 (22%)
NHL repeat 2039..2065 CDD:271320 8/32 (25%)
RHS_repeat 2183..2218 CDD:283287 16/48 (33%)
RhsA 2347..3020 CDD:225750 47/251 (19%)
YD_repeat_2x 2795..2836 CDD:273728
Rhs_assc_core 2905..2980 CDD:274730
Tox-GHH 3193..3268 CDD:292269
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1225
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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