Sequence 1: | NP_067272.1 | Gene: | Tlr4 / 21898 | MGIID: | 96824 | Length: | 835 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262995.1 | Gene: | Tl / 43222 | FlyBaseID: | FBgn0262473 | Length: | 1117 | Species: | Drosophila melanogaster |
Alignment Length: | 812 | Identity: | 190/812 - (23%) |
---|---|---|---|
Similarity: | 326/812 - (40%) | Gaps: | 232/812 - (28%) |
- Green bases have known domain annotations that are detailed below.
Mouse 41 DQKLSKVPDDIPSSTKNID---LSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHH 102
Mouse 103 LSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN---FIHSC 164
Mouse 165 KLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN-------PIDFIQDQAF 222
Mouse 223 QGIKLHELTLRGNFNSSNIMKTC-----LQNLAGLHVHRLILGEFKDERN-LEIFEPSIMEGLCD 281
Mouse 282 VTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTL 346
Mouse 347 DLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII 411
Mouse 412 MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 476
Mouse 477 AGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQL 541
Mouse 542 YSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLVNVEQMTC 606
Mouse 607 ATPVEMNTSLVLDFNNSTCYMYKTI-ISVSVV---SVIVVSTVAFLIYHF--------YFHLILI 659
Mouse 660 AGCKKYSRGESI-----YDAFVIYSSQNEDWVRNELVKNLEEGVPRFHLCLHYRDFIPGVAIAAN 719
Mouse 720 IIQEGFHKSRKVIVVVSRHFIQSRWCIFEYEIAQTWQFLSSRSGIIFIV---LEKVEKSLLRQQV 781
Mouse 782 ELYRLLSRNTYLEWEDNPLGRHIFWRRLKNAL 813 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tlr4 | NP_067272.1 | LRR_8 | 53..113 | CDD:290566 | 19/62 (31%) |
LRR 1 | 54..75 | 6/23 (26%) | |||
leucine-rich repeat | 58..78 | CDD:275380 | 6/22 (27%) | ||
LRR 2 | 78..99 | 7/20 (35%) | |||
leucine-rich repeat | 79..102 | CDD:275380 | 7/22 (32%) | ||
LRR 3 | 102..123 | 6/20 (30%) | |||
leucine-rich repeat | 103..126 | CDD:275380 | 6/22 (27%) | ||
LRR 4 | 126..147 | 4/20 (20%) | |||
leucine-rich repeat | 127..150 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 150..214 | CDD:290566 | 20/73 (27%) | ||
LRR 5 | 150..171 | 5/23 (22%) | |||
leucine-rich repeat | 151..175 | CDD:275380 | 5/26 (19%) | ||
LRR 6 | 175..198 | 10/22 (45%) | |||
leucine-rich repeat | 176..204 | CDD:275380 | 12/27 (44%) | ||
LRR 7 | 204..224 | 5/26 (19%) | |||
leucine-rich repeat | 205..226 | CDD:275380 | 5/27 (19%) | ||
LRR 8 | 226..247 | 3/25 (12%) | |||
LRR 9 | 248..269 | 4/21 (19%) | |||
LRR 10 | 329..349 | 1/19 (5%) | |||
leucine-rich repeat | 331..350 | CDD:275380 | 1/18 (6%) | ||
LRR 11 | 350..370 | 3/19 (16%) | |||
leucine-rich repeat | 351..372 | CDD:275380 | 3/20 (15%) | ||
LRR_RI | <369..555 | CDD:238064 | 35/185 (19%) | ||
LRR 12 | 372..392 | 2/19 (11%) | |||
leucine-rich repeat | 373..398 | CDD:275380 | 2/24 (8%) | ||
LRR 13 | 398..420 | 1/21 (5%) | |||
leucine-rich repeat | 399..421 | CDD:275380 | 1/21 (5%) | ||
LRR 14 | 421..442 | 5/20 (25%) | |||
leucine-rich repeat | 422..446 | CDD:275380 | 5/23 (22%) | ||
LRR 15 | 446..467 | 2/20 (10%) | |||
leucine-rich repeat | 447..470 | CDD:275380 | 3/22 (14%) | ||
LRR 16 | 470..490 | 6/19 (32%) | |||
leucine-rich repeat | 471..495 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 494..554 | CDD:290566 | 15/59 (25%) | ||
LRR 17 | 495..516 | 8/20 (40%) | |||
leucine-rich repeat | 496..519 | CDD:275380 | 7/22 (32%) | ||
LRR 18 | 519..540 | 4/20 (20%) | |||
leucine-rich repeat | 520..543 | CDD:275380 | 4/22 (18%) | ||
LRR 19 | 543..564 | 3/20 (15%) | |||
Interaction with SCIMP. /evidence=ECO:0000269|PubMed:28098138 | 670..835 | 54/152 (36%) | |||
TIR | 672..813 | CDD:214587 | 52/143 (36%) | ||
Tl | NP_001262995.1 | LRR_8 | 174..233 | CDD:290566 | |
leucine-rich repeat | 176..198 | CDD:275380 | |||
leucine-rich repeat | 199..222 | CDD:275380 | |||
LRR_RI | 216..542 | CDD:238064 | 50/186 (27%) | ||
LRR_8 | 221..281 | CDD:290566 | |||
leucine-rich repeat | 223..270 | CDD:275380 | |||
leucine-rich repeat | 271..294 | CDD:275380 | |||
leucine-rich repeat | 295..320 | CDD:275380 | |||
leucine-rich repeat | 321..343 | CDD:275380 | |||
LRR_8 | 342..402 | CDD:290566 | 7/26 (27%) | ||
leucine-rich repeat | 344..367 | CDD:275380 | |||
leucine-rich repeat | 368..391 | CDD:275380 | 4/15 (27%) | ||
LRR_8 | 390..450 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 392..415 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 416..439 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 440..474 | CDD:275380 | 11/46 (24%) | ||
leucine-rich repeat | 475..498 | CDD:275380 | 5/26 (19%) | ||
LRR_8 | 477..534 | CDD:290566 | 19/63 (30%) | ||
leucine-rich repeat | 499..520 | CDD:275380 | 9/20 (45%) | ||
leucine-rich repeat | 523..552 | CDD:275380 | 6/31 (19%) | ||
LRRCT | 561..619 | CDD:214507 | 12/58 (21%) | ||
LRRNT | 631..667 | CDD:214470 | 10/98 (10%) | ||
leucine-rich repeat | 664..693 | CDD:275380 | 10/93 (11%) | ||
LRR_8 | 669..726 | CDD:290566 | 24/98 (24%) | ||
leucine-rich repeat | 694..715 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 716..737 | CDD:275380 | 12/54 (22%) | ||
LRRCT | 751..800 | CDD:214507 | 11/49 (22%) | ||
TIR | 858..996 | CDD:214587 | 54/146 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D147327at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24365 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |