DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klf10 and Spps

DIOPT Version :9

Sequence 1:XP_036015210.1 Gene:Klf10 / 21847 MGIID:1101353 Length:547 Species:Mus musculus
Sequence 2:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster


Alignment Length:486 Identity:127/486 - (26%)
Similarity:188/486 - (38%) Gaps:135/486 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse   129 NRPVTPVSDTSEDDSLLPG--TPDLQTVPAFCLTPPYSPSDF-EPSQGSNLTA----SAPSTGHF 186
            |:|:|..:...:..:::|.  .|:..|.|    ||  :|:.. .|.|..||.|    :.|..|..
  Fly   440 NQPITITNAQGQQLTVIPAQLRPNAPTAP----TP--APAGVPTPMQMPNLQALPIQNIPGLGQV 498

Mouse   187 KSFSDAAKPPG----------ATPFKEEEKN--------PLAAPPLPKAQATSVIRHTADAQLCN 233
            :.......||.          ..|....:..        |...|..|....||:.:...|     
  Fly   499 QIIHANQLPPNLPANFQQVLTQLPMSHPQVQTQGQVQVMPKQEPQSPTQMITSIKQEPPD----- 558

Mouse   234 HQSCPVKAASILNYQDNSFRRRTHGNVEATRKNIPCAAVSPNRSKPEPSTVSDGDEKAGAALYDF 298
                                  |.|.:.|| .|.|..|.:||.:.|:...:.....::. :|...
  Fly   559 ----------------------TFGPISAT-GNPPAPASTPNTASPQQQQIKFLHTESN-SLSSL 599

Mouse   299 AVPSSETVICRSQPAPSSPVQKSVLVSSPTVSTGGVPPLPVICQMVPLPANNSLVSTVVPSTPPS 363
            ::|:|..:....|.|.::|       ::|..:    .|:|     |.|||.:.:.:....||..:
  Fly   600 SIPASIQITALPQQATNTP-------NTPATT----QPIP-----VSLPARSKVNAVTTSSTQIT 648

Mouse   364 QPPAVCSPVLFMGTQVPEGTVVFVVPQP--------VVQSPRPPVVSPSGTRLS---PIAPAPGF 417
            ..|.             .|.||.|..|.        ...:....:.:||.:.|:   .:|...|.
  Fly   649 IAPT-------------GGQVVSVTTQARGATASIRSTNTSTTTITTPSQSHLNMNISVASVGGA 700

Mouse   418 S-------------PSAARVT--------PQIDSSRVRSHICSHPGCGKTYFKSSHLKAHVRTHT 461
            :             |...||.        .:..|.:.|.|||...||.|.|.|:|||:||:|.||
  Fly   701 ATGGGGGTATGEPKPRLKRVACTCPNCTDGEKHSDKKRQHICHITGCHKVYGKTSHLRAHLRWHT 765

Mouse   462 GEKPFSCSWKGCERRFARSDELSRHRRTHTGEKKFACPMCDRRFMRSDHLTKHARRHLSAK---- 522
            ||:||.|||..|.:||.|||||.||||||||||:|.|..|:::|||||||:||.:.|..::    
  Fly   766 GERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRSGVE 830

Mouse   523 ----------KLPNWQMEVSKLNDIALPPTP 543
                      |..|....:|.:|.|.....|
  Fly   831 LIELSIKQETKGGNAPKSISTVNGIVTIEIP 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klf10XP_036015210.1 KLF10_N 101..436 CDD:409241 67/363 (18%)
COG5048 441..>491 CDD:227381 33/49 (67%)
C2H2 Zn finger 441..460 CDD:275368 11/18 (61%)
C2H2 Zn finger 468..490 CDD:275368 15/21 (71%)
zf-C2H2 496..518 CDD:395048 12/21 (57%)
C2H2 Zn finger 498..518 CDD:275368 11/19 (58%)
SppsNP_001262902.1 COG5048 <725..827 CDD:227381 56/101 (55%)
C2H2 Zn finger 742..764 CDD:275368 12/21 (57%)
zf-H2C2_2 756..783 CDD:290200 17/26 (65%)
C2H2 Zn finger 772..794 CDD:275368 15/21 (71%)
zf-H2C2_2 786..809 CDD:290200 15/22 (68%)
zf-C2H2 800..822 CDD:278523 12/21 (57%)
C2H2 Zn finger 802..822 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.