DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACSL4 and lcf1

DIOPT Version :10

Sequence 1:NP_075266.1 Gene:ACSL4 / 2182 HGNCID:3571 Length:711 Species:Homo sapiens
Sequence 2:NP_595726.1 Gene:lcf1 / 2540731 PomBaseID:SPBC18H10.02 Length:676 Species:Schizosaccharomyces pombe


Alignment Length:697 Identity:221/697 - (31%)
Similarity:374/697 - (53%) Gaps:57/697 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    45 RIKAKPTSDKP----GSPYRSVTHFDSLAVIDIPGADTLDKLFDHAVSKFGKKDSLGTREILSEE 105
            ::::|..| ||    .:.||:....|.|.........||..:|.|:|.:||.|.::|.|.::.|.
pombe     2 KVQSKAIS-KPKEHESAIYRNANFPDHLVETYSDDVHTLFDVFRHSVKQFGNKKAMGYRNLVKEH 65

Human   106 NEMQPNGKVF---KKLI--------LGNYKWMNYLEVNRRVNNFGSGLTALGLKPKNTIAIFCET 159
            .|.:...||.   ||.:        |.:|.::::.::..:...:...|..|||...:...::..|
pombe    66 VETKMVTKVVDGEKKEVPKSWSYFELSDYNYLSFNDIYDKALRYAGALRKLGLNKGDKFELYAPT 130

Human   160 RAEWMIAAQTCFKYNFPLVTLYATLGKEAVVHGLNESEASYLITSVELLESKLKTALLDISCVKH 224
            .|.|::.|:.|...:..:||.|.|||:|.::|.|.||....:.|...||:: |...|.:|..::.
pombe   131 SAFWLLTAEACLSQSMTIVTAYDTLGEEGLLHSLRESGVRGMYTEGHLLKT-LVNPLKEIESLEV 194

Human   225 IIYVDNKAINKAEYPEGFEIHSMQSVEELGSNP--------ENLGIP--PSRPTPSDMAIVMYTS 279
            |||.::.   |.|        .:::::|:..|.        |.:..|  |..|:|.::..:||||
pombe   195 IIYRNDA---KEE--------DIKTIQEIRPNLKLIKFADFEKMSPPVEPDPPSPEEICCIMYTS 248

Human   280 GSTGRPKGVMMHHSNLIAGMTGQCERIPGLGPKDTYIGYLPLAHVLELTAEISCFTYGCRIGYSS 344
            ||||.||||::.|.|::|.:|...:.:|.:..||..:.||||||:||...|..|..:|..|||::
pombe   249 GSTGLPKGVILSHKNMVAIVTAIVKHVPEVTSKDYLLAYLPLAHILEFAFENICLAWGGTIGYAN 313

Human   345 PLTLSDQSSKIKKGSKGDCTVLKPTLMAAVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLE 409
            ..||.|.:.   :..|||....:||:|..||.:.:.:.|.:|||:...:.:::::|...|..|.:
pombe   314 VRTLVDTNC---RNCKGDINTFRPTIMVGVPAVWEMVRKGIMSKLNAASAVKRSVFWTAYYTKAK 375

Human   410 QIKKGYDAP---LCNLLLFKKVKAL-LGGNVRMMLSGGAPLSPQTHRFMNVCFCCPIGQGYGLTE 470
            .::  ::.|   :.:..:|.|:::: .||.:|..||||:.|||.|.||:::.. ||:..||||||
pombe   376 LMR--HNLPGSCVLDTAVFNKIRSMGTGGRLRYTLSGGSALSPDTKRFLSIVL-CPMLIGYGLTE 437

Human   471 SCGAGTVTEVTDYT-TGRVGAPLICCEIKLKDWQEGGYTINDKPNPRGEIVIGGQNISMGYFKNE 534
            ...|..|.....:. ....|:.|.|.|:||.|.:||.|..:..| |||||.:.|.:::.||...:
pombe   438 ISAAAMVQNPACFNLDDSAGSLLPCTEMKLVDCEEGNYNSHGHP-PRGEIWLRGPSLTRGYLNRD 501

Human   535 EKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLID 599
            ::..|.::.|    .||.|||:||..|:|.|:||||||:|||.|.|||::|.|:|:..:...|:.
pombe   502 KENKESFTPD----GWFRTGDVGELTPEGLLRIIDRKKNLVKTQNGEYIALEKLESRYRTSSLVS 562

Human   600 NICAFAKSDQSYVISFVVPNQKRLTLLA-QQKGV--EGTWVDICNNPAMEAEILKEIREAANAMK 661
            |||.:|...:...::.:|||:..:..|| :|.|:  :.:|.::|:|..:...:..::.....:..
pombe   563 NICVYADQTKVKPLAIIVPNEPVVRKLATEQAGLSPDASWEEVCHNKKVRQLVYDDLIRIGRSHH 627

Human   662 LERFEIPIKVRLSPEPWTPETGLVTDAFKLKRKELRNHYLKDIERMY 708
            ....|:...|.|.|..:|||.||||.|.||:|:::.:.:.|:|:..|
pombe   628 FANIELIQNVVLVPIEFTPENGLVTAAQKLQRRKILDRFKKEIDAAY 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACSL4NP_075266.1 LC_FACS_euk1 121..696 CDD:341294 193/592 (33%)
lcf1NP_595726.1 LC_FACS_euk1 92..662 CDD:341294 193/592 (33%)

Return to query results.
Submit another query.