DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tgm3 and Tg

DIOPT Version :9

Sequence 1:XP_006499214.1 Gene:Tgm3 / 21818 MGIID:98732 Length:704 Species:Mus musculus
Sequence 2:NP_609174.1 Gene:Tg / 34093 FlyBaseID:FBgn0031975 Length:776 Species:Drosophila melanogaster


Alignment Length:715 Identity:246/715 - (34%)
Similarity:376/715 - (52%) Gaps:50/715 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 VVRSKRTDPDAEA-LQIQNVNWQVPMNRRAHHTDKF----SSQDSIVRRGQPWEIILVCNRSLES 61
            :.:..:||..:.| |.:..|:..:..|...|||..|    :.:..:||||:|:.:.:..||....
  Fly    40 IPQGDKTDGASSAVLGVLKVDLCLEDNHEEHHTSHFYAAAAKEALVVRRGEPFRLKIHFNRDYSP 104

Mouse    62 GED-LNFIVS----TGPQPSESARTKAVFSISG----RSTGGWNAALKANSGNNLAIAIASPVSA 117
            .:| ::||.:    |.|.|.... ..|:....|    ..|..|.|.::::.|..|.:.|..|.:.
  Fly   105 SKDAISFIFTVADDTKPSPGHGT-LNALVPHDGIDYLGDTLEWGAGIESHEGQTLTVLIKPPSTC 168

Mouse   118 PIGLYTLSVEISSRG---RASSLKLGTFIMLFNPWLQADDVFMSNHAERQEYVEEDSGIIYVGST 179
            |:..:.|.::....|   |:..|.|..:: |||||...|.|::.:..:|:|||..|:.:|:.||.
  Fly   169 PVTEWKLDIDTKLLGDGSRSYPLPLPIYV-LFNPWCPDDQVYLEDRDQRKEYVMHDTTLIWRGSY 232

Mouse   180 NRIGMVGWNFGQFEEDILNISLSILDRSLNFRRDPVTDVARRNDPKYVCRVLSAMINGNDDNGVI 244
            ||:....|..||||..:|..||.:|.   ...|.|   .|.|.||..|.|.|||::|..||:||:
  Fly   233 NRLRPSVWKIGQFERHVLECSLKVLG---TVGRIP---PAYRGDPVRVARALSALVNSVDDDGVL 291

Mouse   245 SGNWSGNYTGGVDPRTWNGSVEILKNWKKSGFRPVQFGQCWVFAGTLNTVLRCLGVPSRVITNFN 309
            .||||.:::|||.|..|.||||||:.:.|:. :.|:|.|||.|:|.|.|:.|.||:|||:||.::
  Fly   292 LGNWSEDFSGGVAPTKWTGSVEILQQFYKTQ-KSVKFAQCWNFSGVLTTIARSLGIPSRIITCYS 355

Mouse   310 SAHDTDRNLSVDVYYDAMGNPLE-KGSDSVWNFHVWNEGWFVRTDLG----PTYNGWQVLDATPQ 369
            |||||..:|:|||:.||....|: :.:||:||:|||||.|..|.|||    .|::||||:|||||
  Fly   356 SAHDTQASLTVDVFIDANNKKLDAETTDSIWNYHVWNELWMQRPDLGVGEHGTFDGWQVVDATPQ 420

Mouse   370 ERSQGVFQCGPASVNAIKAGDVDRNFDMIFIFAEVNADRITWIYNNRNNTQKQNSVDTHSIGKYI 434
            |.|..:::.|||||.|:|.||:.|.||..|:|||||||::.|.||..:...|....||.:||..|
  Fly   421 EASDNMYRVGPASVAAVKNGDILRPFDGGFVFAEVNADKLYWRYNGPSQPLKLLRKDTLAIGHLI 485

Mouse   435 STKAVGSNSRMDVTDKYKYPEGSSEERQVHQKALDKLKPNASFGATSSRNPEG----EDKEPSIS 495
            |||||....|.|:||.||:.|.|.|||....|||.:           ||:...    .|....|.
  Fly   486 STKAVLKWEREDITDTYKHAERSEEERSTMLKALKQ-----------SRHAFSRYYLNDNFNDIE 539

Mouse   496 GKFKVTGILAVGKEVSLSLMLKNMTNDR-KTVTMNMTAWTIVYNGTLVHEVWKDSATISLDPEEE 559
            ...::...:.:|:..|:.|.:.|.:..| ...|..::...::|.|....||......:.|:|:..
  Fly   540 FDMELKDDIKIGQSFSVVLKVSNKSESRTHMATGQISCDAVLYTGVGAVEVKTLGFELELEPKSS 604

Mouse   560 IQYPVKIAYSQYERYLKADNMIRITAVCKVPD-EAEVVVERDVILDNPALTLEVLEQAHV-RKPV 622
            ....:::.:.:|...|.:....:|:|..||.| :.:...:.|..:..|.:..::.|.|.| :|.:
  Fly   605 DYVRMEVIFEEYYDKLSSQAAFQISAAAKVKDTDYDYYAQDDFRVRKPDIKFQLGEAAIVAQKEL 669

Mouse   623 NVQMLFSNPLDQPVNNCVLLVEGSGLLRGSLKIDVPSLRPKEKSRIRFEIFPTRSGTKQLLADFS 687
            :|.:...|||..|::..|..|||.| :...||..:..:.....:...|:..|..:|...:||.|:
  Fly   670 DVILRLENPLPIPLHKGVFTVEGPG-IEQPLKFKIAEIPVGGTAAATFKYTPPYAGRGTMLAKFT 733

Mouse   688  687
              Fly   734  733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tgm3XP_006499214.1 Transglut_N 15..129 CDD:366347 31/126 (25%)
TGc 276..368 CDD:214673 50/96 (52%)
Transglut_C 494..599 CDD:366371 20/106 (19%)
Transglut_C 606..702 CDD:366371 23/83 (28%)
TgNP_609174.1 Transglut_N 56..179 CDD:279240 30/123 (24%)
TGc 324..419 CDD:214673 50/94 (53%)
Transglut_C 538..644 CDD:279295 20/105 (19%)
Transglut_C 652..750 CDD:279295 23/83 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 98 1.000 Domainoid score I7154
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11590
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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