DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfand3 and Rabex-5

DIOPT Version :9

Sequence 1:NP_001343194.1 Gene:Zfand3 / 21769 MGIID:1096572 Length:227 Species:Mus musculus
Sequence 2:NP_612093.1 Gene:Rabex-5 / 38144 FlyBaseID:FBgn0262937 Length:696 Species:Drosophila melanogaster


Alignment Length:103 Identity:29/103 - (28%)
Similarity:40/103 - (38%) Gaps:21/103 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 SERSKAPS-------LPPRCPCGFWGSSKTMNLCSKCFAD-FQKKQPDDDSTPSTSNSQSDLFSE 62
            |..::.||       |..|..|||:|:.:...|||.||.: |..||.....|           ..
  Fly     2 STAARPPSLRLGQQDLKCRSGCGFYGTPQNEGLCSMCFREKFNDKQRKLKQT-----------GG 55

Mouse    63 ETTSDNNNTSVTTPTLSPSQQSL--PTELNVTSPSTEE 98
            ||...::::..|....||....|  ..|..|..||.:|
  Fly    56 ETGPGSSSSVATLDRRSPQHAHLQGKVEQQVRKPSDKE 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfand3NP_001343194.1 zf-A20 <19..36 CDD:366793 7/16 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..99 14/60 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..151
zf-AN1 <174..194 CDD:376545
Rabex-5NP_612093.1 zf-A20 17..40 CDD:280010 10/22 (45%)
VPS9 274..373 CDD:280383
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3173
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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