DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfand3 and Rabex-5

DIOPT Version :10

Sequence 1:NP_001343194.1 Gene:Zfand3 / 21769 MGIID:1096572 Length:227 Species:Mus musculus
Sequence 2:NP_612093.1 Gene:Rabex-5 / 38144 FlyBaseID:FBgn0262937 Length:696 Species:Drosophila melanogaster


Alignment Length:103 Identity:29/103 - (28%)
Similarity:40/103 - (38%) Gaps:21/103 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 SERSKAPS-------LPPRCPCGFWGSSKTMNLCSKCFAD-FQKKQPDDDSTPSTSNSQSDLFSE 62
            |..::.||       |..|..|||:|:.:...|||.||.: |..||.....|           ..
  Fly     2 STAARPPSLRLGQQDLKCRSGCGFYGTPQNEGLCSMCFREKFNDKQRKLKQT-----------GG 55

Mouse    63 ETTSDNNNTSVTTPTLSPSQQSL--PTELNVTSPSTEE 98
            ||...::::..|....||....|  ..|..|..||.:|
  Fly    56 ETGPGSSSSVATLDRRSPQHAHLQGKVEQQVRKPSDKE 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfand3NP_001343194.1 zf-A20 <19..36 CDD:460313 7/16 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..99 14/60 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..151
CUZ1 174..>194 CDD:442801
Rabex-5NP_612093.1 zf-A20 17..40 CDD:460313 10/22 (45%)
DUF5601 163..220 CDD:465668
VPS9 274..373 CDD:460489
Blue background indicates that the domain is not in the aligned region.

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