DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tef and Irbp18

DIOPT Version :9

Sequence 1:XP_011243859.1 Gene:Tef / 21685 MGIID:98663 Length:340 Species:Mus musculus
Sequence 2:NP_001261698.1 Gene:Irbp18 / 39243 FlyBaseID:FBgn0036126 Length:113 Species:Drosophila melanogaster


Alignment Length:65 Identity:18/65 - (27%)
Similarity:33/65 - (50%) Gaps:0/65 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse   270 DEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYE 334
            |..|..:|||||.|.:|:|:..:....:...|...|.|:|.||:.::....|.:...:.::.:.|
  Fly    25 DPAYKEKRKKNNEAVQRTREKTKKSAEERKKRIDDLRKQNDALKVQIETSEKHISTLRDLIIQGE 89

Mouse   335  334
              Fly    90  89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TefXP_011243859.1 bZIP_HLF 269..327 CDD:269843 17/56 (30%)
coiled coil 273..324 CDD:269843 16/50 (32%)
Irbp18NP_001261698.1 bZIP_CEBP 24..83 CDD:269841 17/57 (30%)
coiled coil 25..83 CDD:269841 17/57 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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