Protein Alignment Alyref and CG18259

DIOPT Version :9

• Sequence 1: NP_035698.1
• Gene: Alyref / 21681
• MGIID: 1341044
• Length: 255
• Species: Mus musculus
• Sequence 2: NP_573324.1
• Gene: CG18259 / 32866
• FlyBaseID: FBgn0030956
• Length: 474
• Species: Drosophila melanogaster
• Alignment Length: 200
• Identity: 56/200 - (28%)
• Similarity: 78/200 - (39%)
• Gaps: 49/200 - (24%)

Mouse     4 KMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQAAARVNRGGGPMRNRPAIARGAAGG 68
            |.|..:...|..|.::|...|||   |...|..|......|||       |.:|:
  Fly   304 KRDPHISHGIYANENRRKAVGGG---GARDSDSGTDSDGDAAA-------PSKNK---------- 348

Mouse    69 GRNRPAPYS-RPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLK 132
             |..|:|.| |.....|                   |.:||||||...|:.|||:|||::.|.:
  Fly   349 -RRSPSPLSLRTSNTKD-------------------GYRLLVSNLHTNVTTADIRELFSDIGPV- 392

Mouse   133 KAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQSINRG 197
                 ||......|||:|.::....|.||:..|:....|.:||:..||...  :.||.....:..
  Fly   393 -----YDARVVRPGTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPH--SSRRSVHKASSR 450

Mouse   198 GMTRN 202
            .:|.|
  Fly   451 TVTTN 455

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Alyref	NP_035698.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..83		21/79 (27%)
		Sufficient for RNA-binding, interaction with NXF1-NXT1 heterodimer. /evidence=ECO:0000250	16..37		7/20 (35%)
		RRM_THOC4	106..179	CDD:241124	27/72 (38%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	185..255		3/17 (18%)
CG18259	NP_573324.1	RRM	<345..>443	CDD:223796	38/135 (28%)
		RRM_SKAR	366..434	CDD:241125	27/73 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810